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Aliases for ABHD13 Gene

Aliases for ABHD13 Gene

  • Abhydrolase Domain Containing 13 2 3
  • Abhydrolase Domain-Containing Protein 13 3 4
  • C13orf6 3 4
  • Alpha/Beta Hydrolase Domain-Containing Protein 13 3
  • Chromosome 13 Open Reading Frame 6 2
  • BA153I24.2 3
  • EC 3.-.-.- 4
  • BEM46L1 3

External Ids for ABHD13 Gene

Previous Symbols for ABHD13 Gene

  • C13orf6

Summaries for ABHD13 Gene

GeneCards Summary for ABHD13 Gene

ABHD13 (Abhydrolase Domain Containing 13) is a Protein Coding gene. GO annotations related to this gene include hydrolase activity. An important paralog of this gene is ABHD17B.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ABHD13 Gene

Genomics for ABHD13 Gene

Genomic Location for ABHD13 Gene

Start:
108,218,379 bp from pter
End:
108,234,255 bp from pter
Size:
15,877 bases
Orientation:
Plus strand

Genomic View for ABHD13 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ABHD13 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ABHD13 Gene

Regulatory Elements for ABHD13 Gene

Proteins for ABHD13 Gene

  • Protein details for ABHD13 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q7L211-ABHDD_HUMAN
    Recommended name:
    Alpha/beta hydrolase domain-containing protein 13
    Protein Accession:
    Q7L211
    Secondary Accessions:
    • B3KWE7
    • Q8NBW1
    • Q96JX9

    Protein attributes for ABHD13 Gene

    Size:
    337 amino acids
    Molecular mass:
    38548 Da
    Quaternary structure:
    No Data Available
    SequenceCaution:
    • Sequence=AAH70226.1; Type=Erroneous initiation; Evidence={ECO:0000305}; Sequence=AK075195; Type=Erroneous termination; Positions=167; Note=Translated as Leu.; Evidence={ECO:0000305}; Sequence=BAB55387.1; Type=Erroneous initiation; Evidence={ECO:0000305};

neXtProt entry for ABHD13 Gene

Proteomics data for ABHD13 Gene at MOPED

Post-translational modifications for ABHD13 Gene

  • Modification sites at PhosphoSitePlus
  • Glycosylation at Asn299

Other Protein References for ABHD13 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for ABHD13 Gene

Domains for ABHD13 Gene

Gene Families for ABHD13 Gene

HGNC:
  • ABHD :Abhydrolase domain containing

Protein Domains for ABHD13 Gene

Suggested Antigen Peptide Sequences for ABHD13 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q7L211

UniProtKB/Swiss-Prot:

ABHDD_HUMAN
Family:
  • Belongs to the serine esterase family.:
    • Q7L211
genes like me logo Genes that share domains with ABHD13: view

Function for ABHD13 Gene

Enzyme Numbers (IUBMB) for ABHD13 Gene

Gene Ontology (GO) - Molecular Function for ABHD13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016787 hydrolase activity IEA --
genes like me logo Genes that share ontologies with ABHD13: view

Phenotypes for ABHD13 Gene

GenomeRNAi human phenotypes for ABHD13:
genes like me logo Genes that share phenotypes with ABHD13: view

No data available for Molecular function , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ABHD13 Gene

Localization for ABHD13 Gene

Subcellular locations from UniProtKB/Swiss-Prot for ABHD13 Gene

Membrane; Single-pass type II membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for ABHD13 Gene COMPARTMENTS Subcellular localization image for ABHD13 gene
Compartment Confidence
cytosol 1
endoplasmic reticulum 1
extracellular 1
lysosome 1
nucleus 1
peroxisome 1
plasma membrane 1

Gene Ontology (GO) - Cellular Components for ABHD13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016020 membrane IDA 19946888
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with ABHD13: view

Pathways for ABHD13 Gene

SuperPathways for ABHD13 Gene

No Data Available

Interacting Proteins for ABHD13 Gene

Selected Interacting proteins: Q7L211-ABHDD_HUMAN for ABHD13 Gene via I2D

Gene Ontology (GO) - Biological Process for ABHD13 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0008152 metabolic process IEA --
genes like me logo Genes that share ontologies with ABHD13: view

No data available for Pathways by source for ABHD13 Gene

Transcripts for ABHD13 Gene

mRNA/cDNA for ABHD13 Gene

Unigene Clusters for ABHD13 Gene

Abhydrolase domain containing 13:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ABHD13 Gene

No ASD Table

Relevant External Links for ABHD13 Gene

GeneLoc Exon Structure for
ABHD13
ECgene alternative splicing isoforms for
ABHD13

Expression for ABHD13 Gene

mRNA expression in normal human tissues for ABHD13 Gene

Integrated Proteomics: protein expression from ProteomicsDB, MOPED, and MaxQB for ABHD13 Gene

SOURCE GeneReport for Unigene cluster for ABHD13 Gene Hs.183528

genes like me logo Genes that share expressions with ABHD13: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for ABHD13 Gene

Orthologs for ABHD13 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for ABHD13 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia ABHD13 35
  • 99.8 (n)
  • 100 (a)
ABHD13 36
  • 100 (a)
OneToOne
cow
(Bos Taurus)
Mammalia ABHD13 35
  • 91.2 (n)
  • 97.92 (a)
ABHD13 36
  • 98 (a)
OneToOne
dog
(Canis familiaris)
Mammalia ABHD13 35
  • 94.86 (n)
  • 99.11 (a)
ABHD13 36
  • 99 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Abhd13 35
  • 86.15 (n)
  • 95.85 (a)
Abhd13 16
Abhd13 36
  • 96 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia ABHD13 36
  • 96 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Abhd13 35
  • 85.95 (n)
  • 95.55 (a)
chicken
(Gallus gallus)
Aves ABHD13 35
  • 86.25 (n)
  • 94.66 (a)
ABHD13 36
  • 95 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia ABHD13 36
  • 93 (a)
OneToOne
African clawed frog
(Xenopus laevis)
Amphibia Xl.12577 35
tropical clawed frog
(Silurana tropicalis)
Amphibia abhd13 35
  • 77.88 (n)
  • 87.8 (a)
Str.12504 35
zebrafish
(Danio rerio)
Actinopterygii abhd13 35
  • 68.25 (n)
  • 79.23 (a)
abhd13 36
  • 79 (a)
OneToOne
African malaria mosquito
(Anopheles gambiae)
Insecta AgaP_AGAP008746 35
  • 48.21 (n)
  • 44.92 (a)
fruit fly
(Drosophila melanogaster)
Insecta Bem46 35
  • 49.4 (n)
  • 46.38 (a)
Bem46 36
  • 41 (a)
OneToOne
worm
(Caenorhabditis elegans)
Secernentea F01D5.8 36
  • 17 (a)
ManyToMany
A. gosspyii yeast
(Ashbya gossypii)
Saccharomycetes AGOS_ADL187W 35
  • 43.14 (n)
  • 38.43 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes -- 36
  • 37 (a)
OneToMany
-- 38
YNL320W 35
  • 47.69 (n)
  • 37.15 (a)
K. lactis yeast
(Kluyveromyces lactis)
Saccharomycetes KLLA0E20989g 35
  • 47.66 (n)
  • 37.89 (a)
thale cress
(Arabidopsis thaliana)
eudicotyledons WAV2 35
  • 48.16 (n)
  • 37.87 (a)
rice
(Oryza sativa)
Liliopsida Os07g0608300 35
  • 48.01 (n)
  • 39.18 (a)
bread mold
(Neurospora crassa)
Ascomycetes NCU03276 35
  • 47.09 (n)
  • 41.27 (a)
fission yeast
(Schizosaccharomyces pombe)
Schizosaccharomycetes bem46 35
  • 51.56 (n)
  • 44.92 (a)
sea squirt
(Ciona intestinalis)
Ascidiacea Cin.8795 35
sea squirt
(Ciona savignyi)
Ascidiacea CSA.2268 36
  • 42 (a)
OneToOne
Species with no ortholog for ABHD13:
  • Actinobacteria (Mycobacterium tuberculosis)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for ABHD13 Gene

ENSEMBL:
Gene Tree for ABHD13 (if available)
TreeFam:
Gene Tree for ABHD13 (if available)

Paralogs for ABHD13 Gene

Paralogs for ABHD13 Gene

genes like me logo Genes that share paralogs with ABHD13: view

Variants for ABHD13 Gene

Sequence variations from dbSNP and Humsavar for ABHD13 Gene

SNP ID Clin Chr 13 pos Sequence Context AA Info Type MAF
rs928550 -- 108,224,305(+) GGACT(C/G)TATAG intron-variant
rs1055859 -- 108,230,111(+) GACTC(A/C)CAATG reference, missense
rs1151405 -- 108,222,439(-) CATTT(A/T)TTTAA intron-variant
rs1151406 -- 108,234,747(-) AACTC(A/C)TTCTG downstream-variant-500B
rs1473792 -- 108,225,281(+) GTAAA(C/T)TGAGA intron-variant

Relevant External Links for ABHD13 Gene

HapMap Linkage Disequilibrium report
ABHD13

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for ABHD13 Gene

Disorders for ABHD13 Gene

Relevant External Links for ABHD13

Genetic Association Database (GAD)
ABHD13
Human Genome Epidemiology (HuGE) Navigator
ABHD13
genes like me logo Genes that share disorders with ABHD13: view

No data available for UniProtKB/Swiss-Prot for ABHD13 Gene

Publications for ABHD13 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  2. The DNA sequence and analysis of human chromosome 13. (PMID: 15057823) Dunham A. … Ross M.T. (Nature 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. Signal sequence and keyword trap in silico for selection of full- length human cDNAs encoding secretion or membrane proteins from oligo- capped cDNA libraries. (PMID: 16303743) Otsuki T. … Isogai T. (DNA Res. 2005) 3 4
  5. Conduct disorder and ADHD: evaluation of conduct problems as a categorical and quantitative trait in the international multicentre ADHD genetics study. (PMID: 18951430) Anney R.J. … Gill M. (Am. J. Med. Genet. B Neuropsychiatr. Genet. 2008) 3 48

Products for ABHD13 Gene

Sources for ABHD13 Gene

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