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Aliases for ABHD11-AS1 Gene

Subcategory (RNA class) for ABHD11-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ABHD11-AS1 Gene

  • ABHD11 Antisense RNA 1 (Tail To Tail) 2 3 5
  • Williams Beuren Syndrome Chromosome Region 26 (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 35 2 3
  • Williams Beuren Syndrome Chromosome Region 26 2
  • ABHD11 Antisense RNA 1 (Non-Protein Coding) 3
  • Non-Protein Coding RNA 35 2
  • NCRNA00035 3
  • LINC00035 3
  • WBSCR26 3

External Ids for ABHD11-AS1 Gene

Previous HGNC Symbols for ABHD11-AS1 Gene

  • WBSCR26
  • LINC00035

Previous GeneCards Identifiers for ABHD11-AS1 Gene

  • GC07P073151

Summaries for ABHD11-AS1 Gene

GeneCards Summary for ABHD11-AS1 Gene

ABHD11-AS1 (ABHD11 Antisense RNA 1 (Tail To Tail)) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with ABHD11-AS1 include williams-beuren syndrome.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ABHD11-AS1 Gene

Genomics for ABHD11-AS1 Gene

Regulatory Elements for ABHD11-AS1 Gene

Enhancers for ABHD11-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around ABHD11-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for ABHD11-AS1 Gene

Chromosome:
7
Start:
73,735,038 bp from pter
End:
73,736,054 bp from pter
Size:
1,017 bases
Orientation:
Plus strand

Genomic View for ABHD11-AS1 Gene

Genes around ABHD11-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ABHD11-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ABHD11-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ABHD11-AS1 Gene

Proteins for ABHD11-AS1 Gene

Post-translational modifications for ABHD11-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ABHD11-AS1 Gene

Domains & Families for ABHD11-AS1 Gene

Gene Families for ABHD11-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ABHD11-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ABHD11-AS1 Gene

Function for ABHD11-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ABHD11-AS1 Gene

Localization for ABHD11-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ABHD11-AS1 Gene

Pathways & Interactions for ABHD11-AS1 Gene

SuperPathways for ABHD11-AS1 Gene

No Data Available

Interacting Proteins for ABHD11-AS1 Gene

Gene Ontology (GO) - Biological Process for ABHD11-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ABHD11-AS1 Gene

Drugs & Compounds for ABHD11-AS1 Gene

No Compound Related Data Available

Transcripts for ABHD11-AS1 Gene

mRNA/cDNA for ABHD11-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ABHD11-AS1 Gene

No ASD Table

Relevant External Links for ABHD11-AS1 Gene

GeneLoc Exon Structure for
ABHD11-AS1
ECgene alternative splicing isoforms for
ABHD11-AS1

Expression for ABHD11-AS1 Gene

mRNA expression in normal human tissues for ABHD11-AS1 Gene

genes like me logo Genes that share expression patterns with ABHD11-AS1: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for ABHD11-AS1 Gene

Orthologs for ABHD11-AS1 Gene

Evolution for ABHD11-AS1 Gene

ENSEMBL:
Gene Tree for ABHD11-AS1 (if available)
TreeFam:
Gene Tree for ABHD11-AS1 (if available)

No data available for Orthologs for ABHD11-AS1 Gene

Paralogs for ABHD11-AS1 Gene

No data available for Paralogs for ABHD11-AS1 Gene

Variants for ABHD11-AS1 Gene

Sequence variations from dbSNP and Humsavar for ABHD11-AS1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs13233747 -- 73,734,972(+) GGGGT(A/G)GGGCC upstream-variant-2KB
rs13438686 -- 73,733,491(+) cccca(C/T)ctcta upstream-variant-2KB
rs34465531 -- 73,734,334(+) GGTGG(C/T)GGGCG upstream-variant-2KB
rs35554452 -- 73,734,794(+) GCCTC(A/G)GCCTC upstream-variant-2KB
rs35614186 -- 73,734,703(+) GACAA(C/G)GTCTT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ABHD11-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv7325n71 CNV Loss 21882294
nsv831028 CNV Loss 17160897
nsv469841 CNV Complex 16826518
nsv888371 CNV Loss 21882294

Relevant External Links for ABHD11-AS1 Gene

HapMap Linkage Disequilibrium report
ABHD11-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ABHD11-AS1 Gene

Disorders for ABHD11-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ABHD11-AS1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
williams-beuren syndrome
  • fanconi schlesinger syndrome
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for ABHD11-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ABHD11-AS1
genes like me logo Genes that share disorders with ABHD11-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ABHD11-AS1 Gene

Publications for ABHD11-AS1 Gene

  1. The striatal long noncoding RNA Abhd11os is neuroprotective against an N-terminal fragment of mutant huntingtin in vivo. (PMID: 25619660) Francelle L. … Brouillet E. (Neurobiol. Aging 2015) 2 3 67
  2. Increased expression of long noncoding RNA ABHD11-AS1 in gastric cancer and its clinical significance. (PMID: 24984296) Lin X. … Guo J. (Med. Oncol. 2014) 2 3
  3. Using gastric juice lncRNA-ABHD11-AS1 as a novel type of biomarker in the screening of gastric cancer. (PMID: 26280398) Yang Y. … Guo J. (Tumour Biol. 2015) 3
  4. Williams-Beuren syndrome TRIM50 encodes an E3 ubiquitin ligase. (PMID: 18398435) Micale L. … Reymond A. (Eur. J. Hum. Genet. 2008) 3

Products for ABHD11-AS1 Gene

Sources for ABHD11-AS1 Gene

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