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Aliases for ABHD11-AS1 Gene

Subcategory (RNA class) for ABHD11-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ABHD11-AS1 Gene

  • ABHD11 Antisense RNA 1 (Tail To Tail) 2 3
  • Williams Beuren Syndrome Chromosome Region 26 (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 35 2 3
  • WBSCR26 3 6
  • Williams Beuren Syndrome Chromosome Region 26 2
  • ABHD11 Antisense RNA 1 (Non-Protein Coding) 3
  • Non-Protein Coding RNA 35 2
  • NCRNA00035 3
  • LINC00035 3

External Ids for ABHD11-AS1 Gene

Previous Symbols for ABHD11-AS1 Gene

  • WBSCR26
  • LINC00035

Summaries for ABHD11-AS1 Gene

GeneCards Summary for ABHD11-AS1 Gene

ABHD11-AS1 (ABHD11 Antisense RNA 1 (Tail To Tail)) is a RNA Gene, and belongs to non-coding RNA RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ABHD11-AS1 Gene

Genomics for ABHD11-AS1 Gene

Genomic Location for ABHD11-AS1 Gene

Start:
73,735,038 bp from pter
End:
73,736,054 bp from pter
Size:
1,017 bases
Orientation:
Plus strand

Genomic View for ABHD11-AS1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for ABHD11-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ABHD11-AS1 Gene

No data available for Regulatory Elements for ABHD11-AS1 Gene

Proteins for ABHD11-AS1 Gene

Post-translational modifications for ABHD11-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ABHD11-AS1 Gene

Domains for ABHD11-AS1 Gene

Gene Families for ABHD11-AS1 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs
genes like me logo Genes that share domains with ABHD11-AS1: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for ABHD11-AS1 Gene

Function for ABHD11-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for ABHD11-AS1 Gene

Localization for ABHD11-AS1 Gene

No data available for Gene Ontology (GO) - Cellular Components for ABHD11-AS1 Gene

Pathways for ABHD11-AS1 Gene

SuperPathways for ABHD11-AS1 Gene

No Data Available

Interacting Proteins for ABHD11-AS1 Gene

Gene Ontology (GO) - Biological Process for ABHD11-AS1 Gene

None

No data available for Pathways by source for ABHD11-AS1 Gene

Transcripts for ABHD11-AS1 Gene

mRNA/cDNA for ABHD11-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for ABHD11-AS1 Gene

No ASD Table

Relevant External Links for ABHD11-AS1 Gene

GeneLoc Exon Structure for
ABHD11-AS1
ECgene alternative splicing isoforms for
ABHD11-AS1

Expression for ABHD11-AS1 Gene

mRNA expression in normal human tissues for ABHD11-AS1 Gene

genes like me logo Genes that share expressions with ABHD11-AS1: view

Orthologs for ABHD11-AS1 Gene

Evolution for ABHD11-AS1 Gene

ENSEMBL:
Gene Tree for ABHD11-AS1 (if available)
TreeFam:
Gene Tree for ABHD11-AS1 (if available)

No data available for Orthologs for ABHD11-AS1 Gene

Paralogs for ABHD11-AS1 Gene

No data available for Paralogs for ABHD11-AS1 Gene

Variants for ABHD11-AS1 Gene

Sequence variations from dbSNP and Humsavar for ABHD11-AS1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs4717809 -- 73,733,606(+) tgcaa(A/G)gagct upstream-variant-2KB
rs11978958 -- 73,733,264(+) TACTT(C/G)GAAGA upstream-variant-2KB
rs13233747 -- 73,734,972(+) GGGGT(A/G)GGGCC upstream-variant-2KB
rs13438686 -- 73,733,491(+) cccca(C/T)ctcta upstream-variant-2KB
rs35554452 -- 73,734,794(+) GCCTC(A/G)GCCTC upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ABHD11-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv7325n71 CNV Loss 21882294
nsv831028 CNV Loss 17160897
nsv469841 CNV Complex 16826518
nsv888371 CNV Loss 21882294

Relevant External Links for ABHD11-AS1 Gene

HapMap Linkage Disequilibrium report
ABHD11-AS1

Disorders for ABHD11-AS1 Gene

No disorders were found for ABHD11-AS1 Gene.

No data available for UniProtKB/Swiss-Prot for ABHD11-AS1 Gene

Publications for ABHD11-AS1 Gene

  1. Increased expression of long noncoding RNA ABHD11-AS1 in gastric cancer and its clinical significance. (PMID: 24984296) Lin X. … Guo J. (Med. Oncol. 2014) 2 3
  2. The striatal long noncoding RNA Abhd11os is neuroprotective against an N-terminal fragment of mutant huntingtin in vivo. (PMID: 25619660) Francelle L. … Brouillet E. (Neurobiol. Aging 2015) 2 3
  3. Williams-Beuren syndrome TRIM50 encodes an E3 ubiquitin ligase. (PMID: 18398435) Micale L. … Reymond A. (Eur. J. Hum. Genet. 2008) 3

Products for ABHD11-AS1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate ABHD11-AS1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for ABHD11-AS1
    • Block miRNA regulation of ABHD11-AS1 using miScript Target Protectors

    Sources for ABHD11-AS1 Gene

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