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Aliases for ABHD11-AS1 Gene

Subcategory (RNA class) for ABHD11-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for ABHD11-AS1 Gene

  • ABHD11 Antisense RNA 1 (Tail To Tail) 2 3 5
  • Williams Beuren Syndrome Chromosome Region 26 (Non-Protein Coding) 2 3
  • Long Intergenic Non-Protein Coding RNA 35 2 3
  • Williams Beuren Syndrome Chromosome Region 26 2
  • ABHD11 Antisense RNA 1 (Non-Protein Coding) 3
  • Non-Protein Coding RNA 35 2
  • NCRNA00035 3
  • LINC00035 3
  • WBSCR26 3

External Ids for ABHD11-AS1 Gene

Previous HGNC Symbols for ABHD11-AS1 Gene

  • WBSCR26
  • LINC00035

Previous GeneCards Identifiers for ABHD11-AS1 Gene

  • GC07P073151

Summaries for ABHD11-AS1 Gene

GeneCards Summary for ABHD11-AS1 Gene

ABHD11-AS1 (ABHD11 Antisense RNA 1 (Tail To Tail)) is an RNA Gene, and is affiliated with the non-coding RNA class. Diseases associated with ABHD11-AS1 include Williams-Beuren Syndrome.

Additional gene information for ABHD11-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ABHD11-AS1 Gene

Genomics for ABHD11-AS1 Gene

Regulatory Elements for ABHD11-AS1 Gene

Enhancers for ABHD11-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07H073736 2 FANTOM5 Ensembl ENCODE dbSUPER 27.7 +5.7 5687 7.8 HDGF FOXA2 PKNOX1 ARNT ZFP64 ARID4B SIN3A DMAP1 ZBTB7B YY1 METTL27 STAG3L3 POM121B ABHD11-AS1 POM121 NSUN5P2 MIR590 FKBP6 BUD23 SPDYE7P
GH07H073773 0.9 ENCODE dbSUPER 38.2 +38.9 38858 1.7 FOXA2 NFIB JUN MAX REST RAD21 YY1 NFIC JUND CEBPA METTL27 ABHD11-AS1 CLDN3 CLDN4
GH07H073766 1.2 ENCODE dbSUPER 26.5 +34.3 34292 4.9 PKNOX1 SIN3A ZBTB7B ZNF121 GLIS2 SCRT2 FOS KLF7 ZHX1 EGR2 METTL27 ABHD11-AS1 GC07M073770 GC07M073769 GC07P073744
GH07H073745 0.9 ENCODE dbSUPER 27.6 +11.3 11337 1 SMARCE1 PKNOX1 ZNF687 DPF2 ZNF592 FOXA1 JUND GATA3 ABHD11-AS1 METTL27 ABHD11 GC07P073744 GC07M073769 GC07M073770
GH07H073821 1.8 FANTOM5 Ensembl ENCODE dbSUPER 9.4 +87.9 87946 3.1 HDGF PKNOX1 ATF1 ARNT SIN3A GLIS2 CBX5 GATA2 ELK1 ATF7 METTL27 VPS37D ABHD11-AS1 CLDN4 CLDN3 GC07P073835
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around ABHD11-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for ABHD11-AS1 Gene

Genomic Locations for ABHD11-AS1 Gene
chr7:73,735,038-73,736,158
(GRCh38/hg38)
Size:
1,121 bases
Orientation:
Plus strand
chr7:73,149,368-73,150,384
(GRCh37/hg19)

Genomic View for ABHD11-AS1 Gene

Genes around ABHD11-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ABHD11-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ABHD11-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ABHD11-AS1 Gene

Proteins for ABHD11-AS1 Gene

Post-translational modifications for ABHD11-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ABHD11-AS1 Gene

Domains & Families for ABHD11-AS1 Gene

Gene Families for ABHD11-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with ABHD11-AS1: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ABHD11-AS1 Gene

Function for ABHD11-AS1 Gene

Phenotypes From GWAS Catalog for ABHD11-AS1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ABHD11-AS1 Gene

Localization for ABHD11-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for ABHD11-AS1 Gene

Pathways & Interactions for ABHD11-AS1 Gene

SuperPathways for ABHD11-AS1 Gene

No Data Available

Interacting Proteins for ABHD11-AS1 Gene

Gene Ontology (GO) - Biological Process for ABHD11-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for ABHD11-AS1 Gene

Drugs & Compounds for ABHD11-AS1 Gene

No Compound Related Data Available

Transcripts for ABHD11-AS1 Gene

mRNA/cDNA for ABHD11-AS1 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for ABHD11-AS1 Gene

No ASD Table

Relevant External Links for ABHD11-AS1 Gene

GeneLoc Exon Structure for
ABHD11-AS1
ECgene alternative splicing isoforms for
ABHD11-AS1

Expression for ABHD11-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for ABHD11-AS1 Gene

genes like me logo Genes that share expression patterns with ABHD11-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for ABHD11-AS1 Gene

Orthologs for ABHD11-AS1 Gene

Evolution for ABHD11-AS1 Gene

ENSEMBL:
Gene Tree for ABHD11-AS1 (if available)
TreeFam:
Gene Tree for ABHD11-AS1 (if available)

No data available for Orthologs for ABHD11-AS1 Gene

Paralogs for ABHD11-AS1 Gene

No data available for Paralogs for ABHD11-AS1 Gene

Variants for ABHD11-AS1 Gene

Sequence variations from dbSNP and Humsavar for ABHD11-AS1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs1000904320 -- 73,733,343(+) TTCAG(A/C)CTGGG upstream-variant-2KB
rs1001117218 -- 73,733,664(+) CAAAA(C/G)ACACA upstream-variant-2KB
rs1001188510 -- 73,734,037(+) TACTC(C/G)GGAGG upstream-variant-2KB
rs1001251575 -- 73,733,106(+) GGTAG(C/T)ATTGA upstream-variant-2KB
rs1001640022 -- 73,734,194(+) AGGCG(C/T)GGTGG upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for ABHD11-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv831028 CNV loss 17160897
nsv469841 CNV loss 16826518
esv2761337 CNV loss 21179565

Relevant External Links for ABHD11-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
ABHD11-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for ABHD11-AS1 Gene

Disorders for ABHD11-AS1 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ABHD11-AS1 Gene - From: GeneCards

Disorder Aliases PubMed IDs
williams-beuren syndrome
  • fanconi schlesinger syndrome
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for ABHD11-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
ABHD11-AS1
genes like me logo Genes that share disorders with ABHD11-AS1: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ABHD11-AS1 Gene

Publications for ABHD11-AS1 Gene

  1. Increased lncRNA ABHD11-AS1 represses the malignant phenotypes of bladder cancer. (PMID: 28157695) Chen M … Cai Z (Oncotarget 2017) 2 3 60
  2. Striatal long noncoding RNA Abhd11os is neuroprotective against an N-terminal fragment of mutant huntingtin in vivo. (PMID: 25619660) Francelle L … Brouillet E (Neurobiology of aging 2015) 2 3 60
  3. Increased expression of long noncoding RNA ABHD11-AS1 in gastric cancer and its clinical significance. (PMID: 24984296) Lin X … Guo J (Medical oncology (Northwood, London, England) 2014) 2 3 60
  4. Using gastric juice lncRNA-ABHD11-AS1 as a novel type of biomarker in the screening of gastric cancer. (PMID: 26280398) Yang Y … Guo J (Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine 2016) 3 60
  5. Williams-Beuren syndrome TRIM50 encodes an E3 ubiquitin ligase. (PMID: 18398435) Micale L … Reymond A (European journal of human genetics : EJHG 2008) 3 60

Products for ABHD11-AS1 Gene

Sources for ABHD11-AS1 Gene

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