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Aliases & Descriptions for ABCG2
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| ABC15 2 | | ABCP 1, 2, 3, 5 | | BCRP 1, 2, 3, 5 | | BCRP1 2, 3 | | BMDP 2 | | CD338 1, 2 | | CDw338 2, 3 | | EST157481 1, 2 | | MGC102821 2 | | MRX 2 | | MXR 1, 2, 3 | | MXR1 2 |
| | | Descriptions |
|---|
| ABC transporter 2 | | ATP-binding cassette transporter G2 2 | | ATP-binding cassette, sub-family G (WHITE), member 2 2 | | ATP-binding cassette, sub-family G, member 2 2 | | Breast cancer resistance protein 2, 3 | | CD338 antigen 3 | | Mitoxantrone resistance-associated protein 3 | | Placenta-specific ATP-binding cassette transporter 3 | | mitoxantrone resistance protein 2 | | placenta specific MDR protein 2 |
|
| | Search outside databases for aliases for ABCG2 genePrevious GC identifers: GC04M089170 GC04M089471 GC04M089370 |
Summaries for ABCG2(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for ABCG2: The membrane-associated protein encoded by this gene is included in the superfamily of ATP-binding cassette (ABC) transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the White subfamily. Alternatively referred to as a breast cancer resistance protein, this protein functions as a xenobiotic transporter which may play a major role in multi-drug resistance. It likely serves as a cellular defense mechanism in response to mitoxantrone and anthracycline exposure. Significant expression of this protein has been observed in the placenta, which may suggest a potential role for this molecule in placenta tissue. [provided by RefSeq] UniProtKB/Swiss-Prot: ABCG2_HUMAN, Q9UNQ0Function: Xenobiotic transporter that may play an important role in the exclusion of xenobiotics from the brain. May be involved in brain-to-blood efflux. Appears to play a major role in the multidrug resistance phenotype of several cancer cell lines. When overexpressed, the transfected cells become resistant to mitoxantrone, daunorubicin and doxorubicin, display diminished intracellular accumulation of daunorubicin, and manifest an ATP-dependent increase in the efflux of rhodamine 123Gene Wiki entry for ABCG2 |
Genomic Location for ABCG2
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the ABCG2 gene 
Entrez Gene cytogenetic band: 4q22 Ensembl cytogenetic band: 4q22.1 HGNC cytogenetic band: 4q22-q23ABCG2 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 4 GeneLoc Exon Structure GeneLoc location for GC04M089314:
(about GC identifiers)
Start:
|
89,230,440 bp from pter |
End:
|
89,299,035 bp from pter |
Size:
|
68,596 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000004.10 NT_016354.18
| Proteins for ABCG2
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: ABCG2_HUMAN, Q9UNQ0 (See
protein sequence)Recommended Name: ATP-binding cassette sub-family G member 2 Size: 655 amino acids; 72314 Da
Subunit: Monomer or homodimer; disulfide-linked
Subcellular location: Cell membrane; Multi-pass membrane protein
Sequence caution: Sequence=AF093771; Type=Frameshift; Positions=486, 586; Sequence=AF093772; Type=Frameshift; Positions=386, 502, 586;
Secondary accessions: A0A1W3 A8K1T5 O95374 Q53ZQ1 Q569L4 Q5YLG4 Q86V64 Q8IX16 Q96LD6 Q96TA8 Q9BY73 Q9NUS0Alternative splicing: 2 isoforms: Q9UNQ0-1 Q9UNQ0-2 Post-translational modifications:
Glycosylation-deficient ABCG2 is normally expressed and functional1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_004818.2
ENSEMBL proteins: ENSP00000237612
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for ABCG2: Assays for ABCG2: | Protein
Domains/ Families for ABCG2(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry Q9UNQ0
ProtoNet protein and cluster: Q9UNQ0 UniProtKB/Swiss-Prot: ABCG2_HUMAN, Q9UNQ0Similarity: Belongs to the ABC transporter family. ABCG (White) subfamilySimilarity: Contains 1 ABC transmembrane type-2 domainSimilarity: Contains 1 ABC transporter domain | Gene Function for ABCG2
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004827
Applied Biosystems Silencer® siRNAs for ABCG2
Sigma-Aldrich siRNA and siRNA Panels for ABCG2  Sigma-Aldrich shRNA for ABCG2  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_004827                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004827                                  untagged cDNA clones in CMV expression vector (see all 2): NM_004827 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_004827
UniProtKB/Swiss-Prot: ABCG2_HUMAN, Q9UNQ0Function: Xenobiotic transporter that may play an important role in the exclusion of xenobiotics from the brain. May be involved in brain-to-blood efflux. Appears to play a major role in the multidrug resistance phenotype of several cancer cell lines. When overexpressed, the transfected cells become resistant to mitoxantrone, daunorubicin and doxorubicin, display diminished intracellular accumulation of daunorubicin, and manifest an ATP-dependent increase in the efflux of rhodamine 123Induction: Up-regulated in brain tumorsGenatlas biochemistry entry for ABCG2:ATP binding cassette superfamily,subfamily G (WHITE),member 2,multidrug resistance transporter,expressed in the placenta,involved in transport of specific molecules into or out the placenta,homolog to Drosophila white and yeast ADP1 gene5 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Abcg2):
5/7 Gene Ontology (GO) molecular function terms (links to tree view) (see all 7
): About this table | Pathways & Interactions for ABCG2
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
Gene Network CentralTM Interacting Genes and Proteins Network for ABCG2 
5/42 Interacting proteins for ABCG2 (ENSP000002376123 Q9UNQ01, 2) via UniProtKB, MINT, and/or STRING (see all 42
)About this table
2 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for ABCG2(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Compounds for ABCG2 available from Tocris Bioscience
| Compound | Action |
CAS
number |
|---|
| Ko 143 | Potent and selective BCRP inhibitor | [461054-93-3] | About this table
10/47 Novoseek chemical compound relationships for ABCG2 gene (see all 47
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| fumitremorgin c |
96.68 |
86 |
12477054 (4), 14613996 (4), 10646850 (3), 16490770 (3) (see all 36) |
| gf 120918 |
91.55 |
54 |
18248513 (3), 10656616 (2), 11309344 (2), 15860656 (2) (see all 24) |
| pheophorbide a |
85.43 |
14 |
19131524 (2), 17250810 (2), 17652262 (1), 17518356 (1) (see all 7) |
| mr20 |
84.30 |
4 |
15788683 (2), 15208643 (1) |
| (125i)iodoarylazidoprazosin |
80.87 |
17 |
16846237 (3), 15598974 (1), 18089721 (1), 17575116 (1) (see all 8) |
| hoechst 33342 |
79.83 |
18 |
19270533 (1), 14612912 (1), 18182157 (1), 15047700 (1) (see all 16) |
| rhodamine 123 |
78.69 |
25 |
14612912 (2), 15139851 (2), 10806112 (1), 15598974 (1) (see all 15) |
| gimatecan |
74.49 |
19 |
17943230 (5), 18089724 (4), 15006540 (2), 11507048 (1) |
| ortataxel |
72.17 |
4 |
14617793 (1), 15060738 (1) |
| oatp |
68.33 |
6 |
17020956 (1), 18762709 (1), 18838068 (1) |
About this table
7 PharmGKB drug compound relationships for ABCG2 geneAbout this table
|
Transcripts for ABCG2(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_004827
Sigma-Aldrich siRNA and siRNA Panels for ABCG2  Sigma-Aldrich shRNA for ABCG2  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_004827 REFSEQ mRNAs for ABCG2 gene: NM_004827.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_004827               OriGene GFP tagged cDNA clone in CMV expression vector: NM_004827                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_004827                                  untagged cDNA clones in CMV expression vector (see all 2): NM_004827  Additional cDNA sequence: AB051855.1 AB056867.1 AF093771.1 AF093772.1 AF098951.2 AF103796.1 AF151530.1 AF463519.1 AK002040.1 AK290000.1 AY017168.1 AY288307.1 AY289766.1 AY333755.1 AY333756.1 BC011032.1 BC021281.2 BC092408.1 CR621441.1 U66681.1 9 DOTS entries: DT.100786807 DT.100786806 DT.453150 DT.100713966 DT.100786805 DT.95109698 DT.102824509 DT.91738759 DT.95197134 24/117 AceView cDNA sequences (see all 117
):F08388 R77787 N59214 F04525 BE765504 AB051855 AI141242 BC011032 Z41385 AB056867 CD365766 AW270740 AY017168 AI805085 AI687015 BC021281 BX370114 BX504168 AI424453 BX104985 AF463519 BG573081 BM853954 BE464452
highest scoring ESTs for ABCG2:AA226753 AA233510 AB051855 AF093771 AF098951 AF103796 AY017168 AY289766 BC011032 BC021281 Unigene Cluster for ABCG2: ATP-binding cassette, sub-family G (WHITE), member 2 Hs.480218 [show with all ESTs]Unigene Representative Sequence: NM_004827
GeneLoc Exon Structure
5 Alternative Splicing Database (ASD) splice patterns (SP) for ABCG2
| ExUns: | 1a | · | 1b | · | 1c | · | 1d | ^ | 2 | ^ | 3a | · | 3b | ^ | 4 | ^ | 5 | ^ | 6 | ^ | 7 | ^ | 8 | ^ | 9 | ^ | 10 | ^ | 11 | ^ | 12 | ^ | 13 | ^ | 14a | · | 14b | ^ | 15 | ^ | 16a | · | 16b | · | 16c | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for ABCG2
1 Ensembl transcript including schematic representation: ENST00000237612
|
Expression for ABCG2
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| ABCG2 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for ABCG2
1 / 2 / 3 4 probe-sets matching ABCG2 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TACTGGCGAA
SOURCE GeneReport for Unigene cluster: Hs.480218
Expression variation in blood from EXPOLDB for ABCG2 UniProtKB/Swiss-Prot: ABCG2_HUMAN, Q9UNQ0Tissue specificity: Highly expressed in placenta. Low expression in small intestine, liver and colon |
Orthologs for ABCG2
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for ABCG2 gene from 5/19 species (see all 19
)
| Organism |
Gene |
Locus |
Description |
Human Similarity |
NCBI accessions |
dog (Canis familiaris) |
ABCG21 |
-- |
ATP-binding cassette, sub-family G (WHITE), member more |
87.01(n) 83.9(a) |
478472 XM_535650.2 XP_535650.2 |
chimpanzee (Pan troglodytes) |
ABCG21 |
-- |
ATP-binding cassette, sub-family G (WHITE), member more |
99.39(n) 99.39(a) |
471251 XM_526633.2 XP_526633.2 |
cow (Bos taurus) |
ABCG21 |
-- |
ATP-binding cassette, sub-family G (WHITE), member more |
88.12(n) 84.56(a) |
536203 NM_001037478.2 NP_001032555.2 |
rat (Rattus norvegicus) |
Abcg21 |
-- |
ATP-binding cassette, sub-family G (WHITE), member more |
82.42(n) 81.5(a) |
312382 NM_181381.2 NP_852046.1 |
mouse (Mus musculus) |
Abcg21, 5 |
6 (28.50 cM)5
|
ATP-binding cassette, sub-family G (WHITE), member more1, 5 |
82.47(n)1 82.11(a)1 |
263571 NM_011920.31 NP_036050.11 AA0085795 AF1038755 (see all 12) |
About this table Species with no ortholog for ABCG2
ENSEMBL Gene Tree for ABCG2 | Paralogs for ABCG2(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for ABCG2(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for ABCG2 (up to first 250kb)
|
Disorders & Mutations for ABCG2
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 603756
10/53 Novoseek disease relationships for ABCG2 gene (see all 53
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| breast cancer |
84.53 |
520 |
19035187 (4), 18820913 (4), 11566359 (3), 11948115 (3) (see all 99) |
| cancer |
63.23 |
155 |
17767037 (4), 16554028 (4), 16024622 (3), 17456779 (3) (see all 87) |
| aml adult |
58.33 |
8 |
12393637 (4), 16278398 (1), 15541485 (1) |
| tumors |
43.76 |
84 |
10825126 (3), 16061644 (3), 15146167 (3), 16562373 (2) (see all 61) |
| nsclc |
41.40 |
53 |
16520985 (4), 17366786 (4), 12912956 (3), 17534875 (3) (see all 13) |
| choriocarcinoma |
39.91 |
8 |
16445700 (2), 11566359 (1), 15634651 (1), 18042733 (1) (see all 6) |
| aml childhood |
36.25 |
2 |
18228020 (1), 12145683 (1) |
| neuroepithelial tumors |
34.77 |
1 |
14636345 (1) |
| leukemia |
33.56 |
8 |
16403267 (1), 10720143 (1), 15521915 (1), 19276246 (1) (see all 6) |
| solid tumor |
31.70 |
5 |
14754410 (1), 16146333 (1), 11193894 (1), 17346156 (1) |
About this table
3 PharmGKB disease relationships for ABCG2 geneAbout this table
Human Gene Mutation Database: ABCG2 Genetic Association Database: ABCG2 Human Genome Epidemiology Navigator: ABCG2 (49 documents)
|
Medical News for ABCG2(Possibly Related Articles in
Doctor's Guide)
About This Section
| |
Publications for ABCG2 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/670 PubMed articles for ABCG2 gene (see all 670
):- A multidrug resistance transporter from human MCF-7 breast cancer cells. (PubMed id 9861027)1, 2, 3, 4 Doyle L.A....Ross D.D. (1998)
- Breast cancer resistance protein impacts clinical outcome in platinum-based chemotherapy for advanced non-small cell lung cancer. (PubMed id 15014021)1, 3, 7 Yoh K....Ochiai A. (2004)
- Diflomotecan pharmacokinetics in relation to ABCG2 421C>A genotype. (PubMed id 15229462)3, 6, 7 Sparreboom A....McLeod H.L. (2004)
- Differential effects of the breast cancer resistance protein on the cellular accumulation and cytotoxicity of 9-aminocamptothecin and 9-nitrocamptothecin. (PubMed id 12810652)1, 3, 7 Rajendra R....Rubin E.H. (2003)
- Natural allelic variants of breast cancer resistance protein (BCRP) and their relationship to BCRP expression in human intestine. (PubMed id 12544509)1, 4, 7 Zamber C.P.... Schuetz E.G. (2003)
- Transport of methotrexate, methotrexate polyglutamates, and 17beta-estradiol 17-(beta-D-glucuronide) by ABCG2: effects of acquired mutations at R482 on methotrexate transport. (PubMed id 12874005)1, 3, 7 Chen Z.S....Kruh G.D. (2003)
- Overexpression of wild-type breast cancer resistance protein mediates methotrexate resistance. (PubMed id 12208758)1, 3, 7 Volk E.L....Schneider E. (2002)
- Detection of single nucleotide polymorphisms in the ABCG2 gene in a Dutch population. (PubMed id 15813675)1, 3, 6 Bosch T.M....Meijerman I. (2005)
- Single nucleotide polymorphisms modify the transporter activity of ABCG2. (PubMed id 15838659)1, 3, 4 Morisaki K.... Bates S.E. (2005)
- N-linked glycosylation of the human ABC transporter ABCG2 on asparagine 596 is not essential for expression, transport activity, or trafficking to the plasma membrane. (PubMed id 15807535)1, 3, 4 Diop N.K. and Hrycyna C.A. (2005)
|
Search for ABCG2
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing ABCG2
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing ABCG2
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ABCG2(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for ABCG2(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for ABCG2:

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Incremental update: 13 Oct 2009
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