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Aliases for ABCC6P2 Gene

Aliases for ABCC6P2 Gene

  • ATP Binding Cassette Subfamily C Member 6 Pseudogene 2 2 3 5
  • ATP-Binding Cassette, Sub-Family C, Member 6 Pseudogene 2 2

External Ids for ABCC6P2 Gene

Previous GeneCards Identifiers for ABCC6P2 Gene

  • GC16U900666
  • GC16M014825
  • GC16M014920

Summaries for ABCC6P2 Gene

GeneCards Summary for ABCC6P2 Gene

ABCC6P2 (ATP Binding Cassette Subfamily C Member 6 Pseudogene 2) is a Pseudogene. Diseases associated with ABCC6P2 include Pseudoxanthoma Elasticum.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for ABCC6P2 Gene

Genomics for ABCC6P2 Gene

Regulatory Elements for ABCC6P2 Gene

Enhancers for ABCC6P2 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around ABCC6P2 on UCSC Golden Path with GeneCards custom track

Promoters for ABCC6P2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around ABCC6P2 on UCSC Golden Path with GeneCards custom track

Genomic Location for ABCC6P2 Gene

14,820,792 bp from pter
14,824,702 bp from pter
3,911 bases
Minus strand

Genomic View for ABCC6P2 Gene

Genes around ABCC6P2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
ABCC6P2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for ABCC6P2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for ABCC6P2 Gene

Proteins for ABCC6P2 Gene

Post-translational modifications for ABCC6P2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for ABCC6P2 Gene

Domains & Families for ABCC6P2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for ABCC6P2 Gene

Function for ABCC6P2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for ABCC6P2 Gene

Localization for ABCC6P2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for ABCC6P2 Gene

Pathways & Interactions for ABCC6P2 Gene

SuperPathways for ABCC6P2 Gene

No Data Available

Interacting Proteins for ABCC6P2 Gene

Gene Ontology (GO) - Biological Process for ABCC6P2 Gene


No data available for Pathways by source and SIGNOR curated interactions for ABCC6P2 Gene

Drugs & Compounds for ABCC6P2 Gene

No Compound Related Data Available

Transcripts for ABCC6P2 Gene

mRNA/cDNA for ABCC6P2 Gene

(2) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for ABCC6P2 Gene

ATP-binding cassette, sub-family C, member 6 pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for ABCC6P2 Gene

No ASD Table

Relevant External Links for ABCC6P2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for ABCC6P2 Gene

mRNA expression in normal human tissues for ABCC6P2 Gene

mRNA differential expression in normal tissues according to GTEx for ABCC6P2 Gene

This gene is overexpressed in Kidney - Cortex (x11.2), Liver (x10.0), and Colon - Transverse (x4.7).

SOURCE GeneReport for Unigene cluster for ABCC6P2 Gene Hs.460057

genes like me logo Genes that share expression patterns with ABCC6P2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for ABCC6P2 Gene

Orthologs for ABCC6P2 Gene

Evolution for ABCC6P2 Gene

Gene Tree for ABCC6P2 (if available)
Gene Tree for ABCC6P2 (if available)

No data available for Orthologs for ABCC6P2 Gene

Paralogs for ABCC6P2 Gene

No data available for Paralogs for ABCC6P2 Gene

Variants for ABCC6P2 Gene

Sequence variations from dbSNP and Humsavar for ABCC6P2 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs62037548 -- 14,824,712(+) GTCGC(C/T)AAGTC upstream-variant-2KB
rs62037549 -- 14,825,253(+) GCCCT(G/T)GTAAG upstream-variant-2KB
rs62037550 -- 14,825,275(+) GAAAC(C/T)TCTAG upstream-variant-2KB
rs62037551 -- 14,825,405(+) ACCTG(C/G)CAACT upstream-variant-2KB
rs111291085 -- 14,822,923(+) GGTAG(C/T)CCCGG nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for ABCC6P2 Gene

Variant ID Type Subtype PubMed ID
dgv811e1 CNV Complex 17122850
nsv905356 CNV Gain 21882294
dgv812e1 CNV Complex 17122850
nsv905357 CNV Gain 21882294
nsv510676 CNV Loss 20534489
nsv511045 OTHER Complex 20534489
nsv7277 OTHER Inversion 18451855
dgv813e1 CNV Complex 17122850
esv32598 CNV Gain 17666407

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for ABCC6P2 Gene

Disorders for ABCC6P2 Gene

MalaCards: The human disease database

(1) MalaCards diseases for ABCC6P2 Gene - From: DISEASES and GeneCards

Disorder Aliases PubMed IDs
pseudoxanthoma elasticum
  • pseudoxanthoma elasticum, modifier of severity of
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for ABCC6P2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with ABCC6P2: view

No data available for UniProtKB/Swiss-Prot and Genatlas for ABCC6P2 Gene

Publications for ABCC6P2 Gene

  1. Copy number variations of the ATP-binding cassette transporter ABCC6 gene and its pseudogenes. (PMID: 22873774) Kringen M.K. … Piehler A.P. (BMC Res Notes 2012) 2 3 67
  2. The human ABC transporter pseudogene family: Evidence for transcription and gene-pseudogene interference. (PMID: 18405356) Piehler A.P. … Kaminski W.E. (BMC Genomics 2008) 3
  3. Identification of a DNA methylation-dependent activator sequence in the pseudoxanthoma elasticum gene, ABCC6. (PMID: 15760889) ArA!nyi T. … VA!radi A. (J. Biol. Chem. 2005) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for ABCC6P2 Gene

Sources for ABCC6P2 Gene