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Aliases & Descriptions for ABCC5
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases ABC33 2 DKFZp686C1782 2 EST277145 1 , 2 MOAT-C 1 , 2 , 3 MOATC 2 , 5 MRP5 1 , 2 , 3 , 5 SMRP 1 , 2 , 3 pABC11 2 , 3
Descriptions ATP-binding cassette sub-family C member 5 3 ATP-binding cassette, sub-family C (CFTR/MRP), member 5 2 ATP-binding cassette, sub-family C, member 5 2 Multi-specific organic anion transporter C 3 canalicular multispecific organic anion transporter C 2
Search outside databases for aliases for ABCC5 genePrevious GC identifers: GC03M180375 GC03M184632 GC03M185039 GC03M184958
Summaries for ABCC5 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for ABCC5 : The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC)transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes.ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20,White). This protein is a member of the MRP subfamily which is involved in multi-drug resistance.This protein functions in the cellular export of its substrate, cyclic nucleotides. This exportcontributes to the degradation of phosphodiesterases and possibly an elimination pathway forcyclic nucleotides. Studies show that this protein provides resistance to thiopurine anticancerdrugs, 6-mercatopurine and thioguanine, and the anti-HIV drug 9-(2-phosphonylmethoxyethyl)adenine.This protein may be involved in resistance to thiopurines in acute lymphoblastic leukemia andantiretroviral nucleoside analogs in HIV-infected patients. Alternative splicing of this gene hasbeen detected; however, the complete sequence and translation initiation site is unclear.[provided by RefSeq] UniProtKB/Swiss-Prot: MRP5_HUMAN, O15440 Function : Acts as a multispecific organic anion pump which can transport nucleotide analogs
Gene Wiki entry for ABCC5
Genomic Location for ABCC5
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the ABCC5 gene Entrez Gene cytogenetic band: 3q27 Ensembl cytogenetic band: 3q27.1 HGNC cytogenetic band: 3q27 ABCC5 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 3 GeneLoc Exon Structure
GeneLoc location for GC03M185120:
(about GC identifiers )
Start:
185,120,416 bp from pter
End:
185,218,421 bp from pter
Size:
98,006 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000003.10 NT_005612.15 Proteins for ABCC5
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: MRP5_HUMAN, O15440 (See
protein sequence )Recommended Name: Multidrug resistance-associated protein 5 Size : 1437 amino acids; 160660 Da
Subcellular location : Membrane; Multi-pass membrane protein
Secondary accessions : O14517 Q9UN85 Q9UNP5 Q9UQC3
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001018881.1 NP_005679.2 ENSEMBL proteins: ENSP00000333926 ENSP00000265586 ENSP00000371935 ENSP00000376358 ENSP00000371934 ENSP00000376357 ENSP00000376356 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 3 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for ABCC5: Assays for ABCC5:
Protein
Domains/ Families for ABCC5(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry O15440 ProtoNet protein and cluster: O15440
UniProtKB/Swiss-Prot: MRP5_HUMAN, O15440 Similarity : Belongs to the ABC transporter family. Conjugate transporter (TC 3.A.1.208) subfamilySimilarity : Contains 2 ABC transmembrane type-1 domainsSimilarity : Contains 2 ABC transporter domains
Gene Function for ABCC5
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001023587 Applied Biosystems Silencer ® siRNAs for ABCC5 Sigma-Aldrich siRNA and siRNA Panels for ABCC5 Sigma-Aldrich shRNA for ABCC5 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001023587                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001023587                                  untagged cDNA clones in CMV expression vector (see all 3 ): AK090667  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_005688 UniProtKB/Swiss-Prot: MRP5_HUMAN, O15440 Function : Acts as a multispecific organic anion pump which can transport nucleotide analogs
Genatlas biochemistry entry for ABCC5 :ATP binding cassettte superfamily,subfamily C (CFTR/MRP),member 5
1 MGI mutant phenotype (inferred from 1 allele ) (MGI details for Abcc5) :5 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for ABCC5
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/9 Interacting proteins for ABCC5 (ENSP00000333926 3 ) via UniProtKB, MINT, and/or STRING (see all 9
)About this table 1 Gene Ontology (GO) biological process term (links to tree view) :
About this table
Drugs & Compounds for ABCC5 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for ABCC5 5 Novoseek chemical compound relationships for ABCC5 gene
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
s-(2,4-dinitrophenyl)glutathione
80.76
2
10840050 (1)
nucleoside
58.05
11
12695538 (2), 10840050 (1), 15897250 (1), 15816546 (1) (see all 5 )
cgmp
55.80
24
11956491 (3), 14507663 (2), 16614078 (2), 17540771 (2) (see all 8 )
atp
35.62
6
17803828 (2), 11956491 (1), 16265591 (1)
platinum
14.57
11
10728601 (5), 16337112 (1)
About this table 5 PharmGKB drug compound relationships for ABCC5 gene About this table
Transcripts for ABCC5(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001023587 Sigma-Aldrich siRNA and siRNA Panels for ABCC5 Sigma-Aldrich shRNA for ABCC5 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001023587 NM_005688
REFSEQ mRNAs for ABCC5 gene (2 alternative transcripts): NM_001023587.1 NM_005688.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001023587 NM_005688
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001023587                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001023587                                  untagged cDNA clones in CMV expression vector (see all 3 ): AK090667  
Additional cDNA sequence: AB005659.1 AB019002.1 AB209103.1 AB209454.1 AF104942.1 AF146074.1 AK090667.1 AL359600.1 AY196484.1 AY754874.1 AY754875.1 AY754876.1 BC015334.1 BC050744.1 BC051358.1 BC140771.1 BC142670.1 BC142719.1 BC144495.1 BX647245.1 BX649032.1 CR590924.1 CR619835.1 U66687.1 U83661.2
15 DOTS entries : DT.91688348 DT.312745 DT.100804398 DT.97801613 DT.455723 DT.86857789 DT.120866548 DT.120866554 DT.91755905 DT.97847973 DT.100746639 DT.120866613 DT.406116 DT.97813740 DT.97813791
24/289 AceView cDNA sequences (see all 289
):AA653545 AL543173 AI911655 BU676278 AA866214 T87404 AW964148 AW135435 BM705344 BU855794 AI493704 CR590924 BM747688 AW341670 BE336596 BU184871 BM310090 AA378333 BM987281 BQ272598 CA489265 BM310353 BQ225211 BC051358
highest scoring ESTs for ABCC5 :AF104942 U83661 AF146074 AA004966 AA188256 AA317271 AA337472 AA338144 AA378333 AA481269
Unigene Cluster for ABCC5: ATP-binding cassette, sub-family C (CFTR/MRP), member 5 Hs.719074 [show with all ESTs ] Unigene Representative Sequence: AF146074 GeneLoc Exon Structure 5/7 Alternative Splicing Database (ASD) splice patterns (SP) for ABCC5 (see all 7
) ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11a · 11b ^ 12 ^ 13 ^ 14 ^ 15a · 15b · 15c ^ 16a · 16b ^ 17 ^ 18 ^ SP1 :             -   -         -   -               -         -       SP2 :             -   -         -   -               -         -       SP3 :                                               -       SP4 :             -   -                                       SP5 :               -                                      
ExUns: 19 ^ 20 ^ 21 ^ 22 ^ 23 ^ 24 ^ 25 ^ 26 ^ 27 ^ 28 ^ 29 ^ 30 ^ 31 ^ 32 ^ 33 ^ 34a · 34b SP1 :                                   SP2 :               -                     SP3 :                                   SP4 :                                   SP5 :                                  
About this scheme ECgene alternative splicing isoforms for ABCC5 7 Ensembl transcripts including schematic representations : ENST00000334444
ENST00000265586
ENST00000382495
ENST00000392579
ENST00000382494
ENST00000392578
ENST00000392577
Expression for ABCC5
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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ABCC5 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for ABCC5 1 / 2 / 3
10 probe-sets matching ABCC5 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: --SOURCE GeneReport for Unigene cluster: Hs.719074 Expression variation in blood from EXPOLDB for ABCC5
Orthologs for ABCC5
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for ABCC5 gene from 5/11 species (see all 11
)
Organism
Gene
Locus
Description
Human Similarity
NCBI accessions
dog (Canis familiaris)
ABCC51
--
ATP-binding cassette, sub-family C (CFTR/MRP), member more
92.46(n) 96.1(a)
478648 XM_852261.1 XP_857354.1
cow (Bos taurus)
ABCC51
--
ATP-binding cassette, sub-family C (CFTR/MRP), member more
91.58(n) 95.27(a)
511769 XM_001251890.1 XP_001251891.1
rat (Rattus norvegicus)
Abcc51
--
ATP-binding cassette, sub-family C (CFTR/MRP), member more
88.23(n) 94.85(a)
116721 NM_053924.1 NP_446376.1
mouse (Mus musculus)
Abcc51 , 5
16 (14.00 cM) 5
ATP-binding cassette, sub-family C (CFTR/MRP), member more 1, 5
88.83(n) 1 95.06(a) 1
27416 1 NM_013790.2 1 NP_038818.2 1 AA119896 5 AB012090 5 (see all 18 )
chicken (Gallus gallus)
ABCC51
--
ATP-binding cassette, sub-family C (CFTR/MRP), member more
79.73(n) 89.12(a)
424947 XM_422754.2 XP_422754.2
About this table Species with no ortholog for ABCC5 ENSEMBL Gene Tree for ABCC5 Paralogs for ABCC5 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for ABCC5 gene ABCC4 2
SNPs/Variants for ABCC5 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for ABCC5 (up to first 250kb)
Disorders & Mutations for ABCC5
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 605251 10/12 Novoseek disease relationships for ABCC5 gene (see all 12
)
About this table 2 PharmGKB disease relationships for ABCC5 gene About this table Human Genome Epidemiology Navigator: ABCC5 (2 documents)
Medical News for ABCC5 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for ABCC5 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/110 PubMed articles for ABCC5 gene (see all 110
): Multidrug-resistance protein 5 is a multispecific organic anion transporter able to transport nucleotide analogs. (PubMed id 10840050) 1, 3, 4, 7 Wijnholds J.... Borst P. (2000) Characterization of MOAT-C and MOAT-D, new members of the MRP/cMOAT subfamily of transporter proteins. (PubMed id 9827529) 1, 2, 3, 4 Belinsky M.G....Kruh G.D. (1998) Expression and localization of the multidrug resistance protein 5 (MRP5/ABCC5), a cellular export pump for cyclic nucleotides, in human heart. (PubMed id 14507663) 1, 3, 7 Dazert P....Kroemer H.K. (2003) The multidrug resistance protein 5 functions as an ATP-dependent export pump for cyclic nucleotides. (PubMed id 10893247) 1, 3, 7 Jedlitschky G....Keppler D. (2000) Detailed structural analysis on both human MRP5 and mouse mrp5 transcripts. (PubMed id 10721709) 1, 3, 4 Suzuki T.... Nishio K. (2000) Analysis of expression of cMOAT (MRP2), MRP3, MRP4, and MRP5, homologues of the multidrug resistance-associated protein gene (MRP1), in human cancer cell lines. (PubMed id 9270026) 1, 3, 4 Kool M.... Borst P. (1997) Thiopurine metabolism and identification of the thiopurine metabolites transported by MRP4 and MRP5 overexpressed in human embryonic kidney cells. (PubMed id 12435799) 1, 7 Wielinga P.R....Borst P. (2002) pABC11 (also known as MOAT-C and MRP5), a member of the ABC family of proteins, has anion transporter activity but does not confer multidrug resistance when overexpressed in human embryonic kidney 293 cells. (PubMed id 10438534) 3, 4 McAleer M.A.... Matthews N. (1999) cDNA cloning of a short type of multidrug resistance protein homologue, SMRP, from a human lung cancer cell line. (PubMed id 9325169) 3, 4 Suzuki T.... Saijo N. (1997) Characterization of the human ABC superfamily: isolation and mapping of 21 new genes using the expressed sequence tags database. (PubMed id 8894702) 2, 3 Allikmets R....Dean M. (1996)
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Genome Databases showing ABCC5
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing ABCC5
(According to HUGE )
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Specialized Databases showing ABCC5 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for ABCC5 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for ABCC5:
Recombinant Proteins (MRP5 ) Antibodies (MRP5 )
Search Tocris compounds for ABCC5
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Proteins for ABCC5
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GeneCards Homepage - Last full update: 1 Jul 2009
Incremental update: 13 Oct 2009