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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

ABCC5 Gene

protein-coding   GIFtS: 61
GCID: GC03M183637

ATP-binding cassette, sub-family C (CFTR/MRP), member 5

 Explore 38 diseases affiliated with
ABCC5 via our new
 Human Malady Compendium 
Biological research products
for ABCC5
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
ATP-Binding Cassette, Sub-Family C (CFTR/MRP), Member 51 2     ATP-Binding Cassette Sub-Family C Member 52 3
MRP51 2 3 5     PABC111
MOAT-C1 2 3     MOATC2 5
SMRP1 2 3     ABC332
EST2771451 2     Canalicular Multispecific Organic Anion Transporter C2
Multi-Specific Organic Anion Transporter C2 3     Multidrug Resistance-Associated Protein 52

External Ids:    HGNC: 561   Entrez Gene: 100572   Ensembl: ENSG000001147707   OMIM: 6052515   UniProtKB: O154403   

Export aliases for ABCC5 gene to outside databases

Previous GC identifers: GC03M180375 GC03M184632 GC03M185039 GC03M184958 GC03M185120 GC03M181047


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for ABCC5:
The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC) transporters. ABC
proteins transport various molecules across extra- and intra-cellular membranes. ABC genes are divided into seven
distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20, White). This protein is a member of the MRP subfamily
which is involved in multi-drug resistance. This protein functions in the cellular export of its substrate, cyclic
nucleotides. This export contributes to the degradation of phosphodiesterases and possibly an elimination pathway for
cyclic nucleotides. Studies show that this protein provides resistance to thiopurine anticancer drugs, 6-mercatopurine
and thioguanine, and the anti-HIV drug 9-(2-phosphonylmethoxyethyl)adenine. This protein may be involved in resistance
to thiopurines in acute lymphoblastic leukemia and antiretroviral nucleoside analogs in HIV-infected patients.
Alternative splicing of this gene has been detected; however, the complete sequence and translation initiation site is
unclear. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: MRP5_HUMAN, O15440
Function: Acts as a multispecific organic anion pump which can transport nucleotide analogs

Gene Wiki entry for ABCC5


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000003.11  NC_018914.1  NT_005612.16  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the ABCC5 gene promoter:
         SRF   NF-1   SRF (504 AA)   POU6F1 (c2)   CUTL1   Tal-1beta   E47   FOXL1   AREB6   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmids (see all 4): ABCC5 promoter sequence
   Search SABiosciences Chromatin IP Primers for ABCC5

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat ABCC5


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 3q27   Ensembl cytogenetic band:  3q27.1   HGNC cytogenetic band: 3q27

ABCC5 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
ABCC5 gene location

GeneLoc information about chromosome 3         GeneLoc Exon Structure

GeneLoc location for GC03M183637:  view genomic region     (about GC identifiers)

Start:
183,637,722 bp from pter      End:
183,735,803 bp from pter
Size:
98,082 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: MRP5_HUMAN, O15440 (See protein sequence)
Recommended Name: Multidrug resistance-associated protein 5  
Size: 1437 amino acids; 160660 Da
Subcellular location: Membrane; Multi-pass membrane protein
Secondary accessions: B9EIQ2 O14517 Q29ZA9 Q29ZB1 Q86W30 Q9UN85 Q9UNP5 Q9UQC3
Alternative splicing: 4 isoforms:  O15440-1   O15440-2   O15440-3   O15440-4   (Predominant isoform in retinal pigment epithelium, bladder, and stomach)

Explore the universe of human proteins at neXtProt for ABCC5: NX_O15440

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_O15440

  • ABCC5 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins (2 alternative transcripts): 
    NP_001018881.1  NP_005679.2  

    ENSEMBL proteins: 
     ENSP00000333926   ENSP00000403510   ENSP00000404302   ENSP00000404809   ENSP00000416840  
     ENSP00000376358   ENSP00000371934   ENSP00000409913   ENSP00000399726   ENSP00000390911  
     ENSP00000265586  
    Reactome Protein details: O15440
    Human Recombinant Protein Products: 
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    Uscn Proteins for ABCC5

    Gene Ontology (GO): 5/6 cellular component terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005624membrane fraction ----
    GO:0005886plasma membrane TAS--
    GO:0005887integral to plasma membrane TAS9827529
    GO:0016020membrane IDA15297306
    GO:0016021integral to membrane ----


    ABCC5 for ontologies           About GeneDecksing



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    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    ABCC5 for domains           About GeneDecksing

    5/6 InterPro domains/families (see all 6):
     IPR003439 ABC_transporter-like
     IPR001140 ABC_transptr_TM_dom
     IPR003593 AAA+_ATPase
     IPR017940 ABC_transporter_type1
     IPR011527 ABC_transptrTM_dom_typ1

    Graphical View of Domain Structure for InterPro Entry O15440

    ProtoNet protein and cluster: O15440

    UniProtKB/Swiss-Prot: MRP5_HUMAN, O15440
    Similarity: Belongs to the ABC transporter superfamily. ABCC family. Conjugate transporter (TC 3.A.1.208) subfamily
    Similarity: Contains 2 ABC transmembrane type-1 domains
    Similarity: Contains 2 ABC transporter domains


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: MRP5_HUMAN, O15440
    Function: Acts as a multispecific organic anion pump which can transport nucleotide analogs

         Genatlas biochemistry entry for ABCC5:
    ATP binding cassettte superfamily,subfamily C (CFTR/MRP),member 5

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    Gene Ontology (GO): 3 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005524ATP binding IEA--
    GO:0008514organic anion transmembrane transporter activity TAS9827529
    GO:0042626ATPase activity, coupled to transmembrane movement of substances IEA--


    ABCC5 for ontologies           About GeneDecksing


    Animal Models:
         Mouse knock-out Abcc5tm1Bor for ABCC5
         1 MGI mutant phenotype (inferred from 1 allele(MGI details for Abcc5):
     cellular 

    ABCC5 for phenotypes           About GeneDecksing


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/11 super-pathways (see all 11About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1MPS IIIC - Sanfilippo syndrome C
    8/14 pathways (see all 14)
    MPS IIIC - Sanfilippo syndrome C1.00
    MPS IIIA - Sanfilippo syndrome A1.00
    MPS I - Hurler syndrome1.00
    MPS IIID - Sanfilippo syndrome D1.00
    Mucopolysaccharidoses1.00
    MPS IX - Natowicz syndrome1.00
    MPS IV - Morquio syndrome A1.00
    MPS II - Hunter syndrome1.00
    2Acetaminophen Pathway, Pharmacokinetics
    Pathway_PA165986194 -need delete1.00
    Acetaminophen Pathway, Pharmacokinetics1.00
    3Fluoropyrimidine Activity
    Fluoropyrimidine Activity1.00
    Fluoropyrimidine Pathway, Pharmacokinetics0.73
    4ABC-family proteins mediated transport
    ABC-family proteins mediated transport1.00
    ABC transporters0.70
    5Disease
    Disease1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 BioSystems Pathway for ABCC5 
        Fluoropyrimidine Activity

    5/20        Reactome Pathways for ABCC5 (see all 20)
        Hyaluronan metabolism
    MPS VI - Maroteaux-Lamy syndrome
    Metabolism
    Disease
    Transmembrane transport of small molecules

    5 PharmGKB Pathways for ABCC5
        Acetaminophen Pathway, Pharmacokinetics
    Fluoropyrimidine Pathway, Pharmacokinetics
    Pathway_PA165986194 -need delete
    Thiopurine Pathway, Pharmacokinetics/Pharmacodynamics
    Zidovudine Pathway, Pharmacokinetics/Pharmacodynamics

    1         Kegg Pathway  (Kegg details for ABCC5):
        ABC transporters


    ABCC5 for pathways           About GeneDecksing

    Interactions:

        Search SABiosciences Gene Network CentralTM Interacting Genes and Proteins Networks for ABCC5

    STRING Interaction Network Preview (showing 5 interactants - click image to see 8)

    5/8 Interacting proteins for ABCC5 (O154403 ENSP000003339264) via UniProtKB, MINT, STRING, and/or I2D (see all 8)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    ESR1P033723, ENSP000002062494I2D: score=1 STRING: ENSP00000206249
    HAS1ENSP000002221154STRING: ENSP00000222115
    HAS3ENSP000003044404STRING: ENSP00000304440
    UBCENSP000003448184STRING: ENSP00000344818
    AK2ENSP000003469214STRING: ENSP00000346921
    About this table

    Gene Ontology (GO): 5/10 biological process terms (GO ID links to tree view) (see all 10):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005975carbohydrate metabolic process TAS--
    GO:0006810transport TAS9827529
    GO:0015711organic anion transport TAS9827529
    GO:0030203glycosaminoglycan metabolic process TAS--
    GO:0030212hyaluronan metabolic process TAS--


    ABCC5 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    ABCC5 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
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    Browse Tocris compounds for ABCC5

    10/13 DrugBank Compounds for ABCC5 (see all 13)    About this table
    CompoundSynonyms CAS #TypeActionsPubMed Ids
    Sildenafil-- 139755-83-2transporterinhibitor12695538 10893247
    Adefovir DipivoxilAdefovir (see all 7)142340-99-6transportersubstrate10840050
    Alprostadil-- 745-65-3transporterinhibitor12835412
    Atorvastatin-- 134523-00-5transportersubstrate19940267
    CisplatinCis-DDP (see all 4)15663-27-1transporterinducer11323161
    Cyclic Adenosine Monophosphate3'-5'-cyclic adenosine monophosphate (see all 5)60-92-4transporterinhibitor10893247
    DinoprostoneDinoprostone Prostaglandin E2 (see all 3)363-24-6transporterinhibitor12835412
    DipyridamoleDipiridamol (see all 6)58-32-2transporterinhibitor12695538
    Glutathione5-L-Glutamyl-L-cysteinylglycine (see all 5)70-18-8transportersubstrate16539673
    Mercaptopurine6 MP (see all 5)50-44-2transportersubstrate10840050

    10/21 Novoseek chemical compound relationships for ABCC5 gene (see all 21)    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    mk 571 80.5 3 16337112 (1), 12695538 (1)
    s-(2,4-dinitrophenyl)glutathione 80.4 2 10840050 (1)
    probenecid 71.2 1 16337112 (1)
    adefovir 64.7 8 19323627 (2), 10840050 (1), 12695538 (1), 16868766 (1)
    thiopurine 60.9 3 19340001 (1), 12435799 (1)
    6 thioguanine 57.7 1 12435799 (1)
    zaprinast 56.8 1 17540771 (1)
    nucleoside 56.7 11 12695538 (2), 10840050 (1), 15897250 (1), 15816546 (1) (see all 5)
    cgmp 54.8 24 11956491 (3), 14507663 (2), 16614078 (2), 17540771 (2) (see all 8)
    6 mercaptopurine 44.4 4 12435799 (4)

    Search CenterWatch for drugs/clinical trials and news about ABCC5 / MRP5 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for ABCC5 gene (2 alternative transcripts): 
    NM_001023587.1  NM_005688.2  

    Unigene Cluster for ABCC5:

    ATP-binding cassette, sub-family C (CFTR/MRP), member 5
    Hs.743953  [show with all ESTs]
    Unigene Representative Sequence: AF146074
    13 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000334444(uc010hxl.3 uc003fmg.3) ENST00000437205(uc011bqt.2)
    ENST00000443497 ENST00000476402 ENST00000492216 ENST00000427120(uc010hxo.3)
    ENST00000443376(uc010hxm.3) ENST00000392579(uc010hxn.3) ENST00000382494(uc003fmh.3)
    ENST00000438979 ENST00000437341 ENST00000446941(uc003fmi.3) ENST00000265586


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    Additional cDNA sequence: 

    AB005659.1 AB019002.1 AB209103.1 AB209454.1 AF104942.1 AF146074.1 AK090667.1 AL359600.1 
    AY196484.1 AY754874.1 AY754875.1 AY754876.1 BC050744.1 BC051358.1 BC140771.1 BC142670.1 
    BC142719.1 BC144495.1 BX647245.1 BX649032.1 U66687.1 U83661.2 

    15 DOTS entries:

    DT.91688348  DT.312745  DT.100804398  DT.97801613  DT.86857789  DT.120866548  DT.120866554  DT.91755905 
    DT.97847973  DT.455723  DT.100746639  DT.120866613  DT.406116  DT.97813740  DT.97813791 

    24/289 AceView cDNA sequences (see all 289):

    AI969666 AA378333 BQ272598 CR590924 BM512329 BM758433 AW135435 BU676278 
    BC050744 BM757802 AA866214 T87404 BC051358 BG024049 BC015334 BU618083 
    BI770139 AI867540 BU184871 BM695701 AW964148 AI911655 BM310090 AA653545 

    GeneLoc Exon Structure

    5/7 Alternative Splicing Database (ASD) splice patterns (SP) for ABCC5 (see all 7)    About this scheme

    ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11a · 11b ^ 12 ^ 13 ^ 14 ^ 15a · 15b · 15c ^ 16a · 16b ^ 17 ^ 18 ^
    SP1:                                      -     -                       -     -                                         -                       -               
    SP2:                                      -     -                       -     -                                         -                       -               
    SP3:                                                                                                                                            -               
    SP4:                                      -     -                                                                                                               
    SP5:                                            -                                                                                                               

    ExUns: 19 ^ 20 ^ 21 ^ 22 ^ 23 ^ 24 ^ 25 ^ 26 ^ 27 ^ 28 ^ 29 ^ 30 ^ 31 ^ 32 ^ 33 ^ 34a · 34b
    SP1:                                                                                                      
    SP2:                                            -                                                         
    SP3:                                                                                                      
    SP4:                                                                                                      
    SP5:                                                                                                      


    ECgene alternative splicing isoforms for ABCC5

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    ABCC5 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TTTGCTGAAC

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image

    ABCC5 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table
    1 LifeMap In Vivo Development Anatomical Compartment/Cell 
    Tissue Anatomical Compartment CellCategory (developmental path)
    HeartLeft VentricleHeart
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization
    Stem Cell Differentiation: 1 LifeMap Cell 
    NameCategory
    Mature brain microvascular endothelial cells (Derivation of blood-...)

    See ABCC5 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for ABCC5

    SOURCE GeneReport for Unigene cluster: Hs.743953

    UniProtKB/Swiss-Prot: MRP5_HUMAN, O15440
    Tissue specificity: All isoforms are equally expressed in retina

        SABiosciences Expression via Pathway-Focused PCR Arrays including ABCC5: 
              Drug Transporters in human mouse rat
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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for ABCC5 gene from 7/20 species (see all 20)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves ABCC51 ATP-binding cassette, sub-family C (CFTR/MRP), member more 79.75(n)
    89.12(a)
      424947  XM_422754.3  XP_422754.2 
    lizard
    (Anolis carolinensis)
    Reptilia ABCC56
    --
    86(a)
    1 ↔ 1
    GL343245.1(1739872-1776502)
    African clawed frog
    (Xenopus laevis)
    Amphibia MGC686082 hypothetical protein MGC68608 75.87(n)    BC060469.1 
    zebrafish
    (Danio rerio)
    Actinopterygii CK024774.12   -- 76.39(n)    CK024774.1 
    honey bee
    (Apis mellifera)
    Insecta --
    --
    39(a)
    1 ↔ 1
    GroupUn.2088(7567-16446)
    worm
    (Caenorhabditis elegans)
    Secernentea mrp-51 Protein MRP-5 48.44(n)
    39.06(a)
      181587  NM_078078.1  NP_510479.1 
    rice
    (Oryza sativa)
    Liliopsida Os02g02884001 hypothetical protein 45.68(n)
    36.76(a)
      4329047  NM_001053118.1  NP_001046583.1 


    ENSEMBL Gene Tree for ABCC5 (if available)
    TreeFam Gene Tree for ABCC5 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for ABCC5 gene
    ABCC42  ABCC122  ABCC12  ABCC102  CFTR2  ABCC82  ABCC62  ABCC32  
    ABCC22  ABCC112  ABCC92  
    18/22 SIMAP similar genes for ABCC5 using alignment to 8 protein entries:     MRP5_HUMAN (see all proteins) (see all similar genes):
    ABCB4    DKFZp434I2115    ABC-transporter    TAP1    ABCC12    MOAT-B
    ABCC11    NG-TRA    CFTR    ABCC4    ara    DKFZp781G125
    ABCC9    ABCC1    ABCC10    ABCC8    ABCC2    ABCC3

    ABCC5 for paralogs           About GeneDecksing



    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/1768 NCBI SNPs in ABCC5 are shown (see all 1768    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 3 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs133263741,2
    C,A--181083047(+) ACATCA/GGTTAC 1 -- int12Minor allele frequency- G:0.00NA 4
    rs726250061,2
    --183637236(+) ACCTCC/TGAGTT 1 -- ds50014Minor allele frequency- T:0.14CSA WA EA 241
    rs23132161,2
    C,F,A,H,--183637251(-) CAGGAA/GAATCA 1 -- ds50018Minor allele frequency- G:0.44NA WA 136
    rs23132151,2
    C,F,A,H,--183637301(-) CCTGGT/CGTGGT 1 -- ds50017Minor allele frequency- C:0.44NA WA 16
    rs1468658771,2
    --183637383(+) AGGGTA/CATTAT 1 -- ds50010--------
    rs1393005091,2
    --183637423(+) AACTAC/TTCATT 1 -- ds50010--------
    rs38051141,2
    C,F,H,--183637722(-) GTAAAA/CCTCTT 1 -- ut3124Minor allele frequency- C:0.16EA NA NS WA 4176
    rs5621,2
    C,F,A,H,--183637845(+) TTCAAC/TTGATG 1 -- ut3130Minor allele frequency- T:0.48MN EA NA NS WA CSA 4120
    rs1919572721,2
    --183637883(+) ACCAGC/GCCCAC 1 -- ut310--------
    rs1433300111,2
    --183637898(+) CAAAGC/GGGGTT 1 -- ut310--------

    HapMap Linkage Disequilibrium report for ABCC5 (183637722 - 183735803 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for ABCC5
         1 CNV: 68514

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    ABCC5 for disorders           About GeneDecksing

    OMIM gene information: 605251    OMIM disorders: --

    20/38 diseases for ABCC5 (see all 38):    About MalaCards
    acute lymphoblastic leukemia    lymphoblastic leukemia    dubin-johnson syndrome    dysembryoplastic neuroepithelial tumor
    leukemia    arteriovenous malformation    status epilepticus    intractable epilepsy
    acute liver failure    benign mesothelioma    hearing loss    malignant mesothelioma
    acute myeloid leukemia    herpes simplex    myeloid leukemia    malignant glioma
    cystic fibrosis    rheumatoid arthritis    colon adenocarcinoma    lung cancer

    10/12 Novoseek disease relationships for ABCC5 gene (see all 12)    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    breast cancer 40.9 12 10739113 (1), 15581025 (1), 17518506 (1), 12153153 (1) (see all 9)
    cancer 26.6 4 9270026 (1), 16337112 (1)
    lymphoblastic leukemia acute 26.2 3 10840050 (1), 12816874 (1)
    glioma 24.1 5 16193381 (4)
    arteriovenous malformations 15.9 1 16193381 (1)
    epilepsy 12.6 2 12699350 (1), 16193381 (1)
    small cell lung cancer 9.13 1 10100721 (1)
    leukemia 7.28 1 19142964 (1)
    immunodeficiency 2.35 1 15105153 (1)
    cancer lung 2.27 20 10728601 (6), 11745426 (3), 11766988 (1)

    Human Genome Epidemiology (HuGE) Navigator: ABCC5 (8 documents)

    Export disorders for ABCC5 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for ABCC5 gene, integrated from 9 sources (see all 137):
    (articles sorted by number of sources associating them with ABCC5)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Characterization of MOAT-C and MOAT-D, new members of the MRP/cMOAT subfamily of transporter proteins. (PubMed id 9827529)1, 2, 3, 9 Belinsky M.G.... Kruh G.D. (1998)
    2. Multidrug-resistance protein 5 is a multispecific organic anion transporter able to transport nucleotide analogs. (PubMed id 10840050)1, 2, 7, 9 Wijnholds J.... Borst P. (2000)
    3. Characterization of the transport of nucleoside analog drugs by the human multidrug resistance proteins MRP4 and MRP5. (PubMed id 12695538)1, 7, 9 Reid G....Borst P. (2003)
    4. Detailed structural analysis on both human MRP5 and mouse mrp5 transcripts. (PubMed id 10721709)1, 2, 9 Suzuki T.... Nishio K. (2000)
    5. Analysis of expression of cMOAT (MRP2), MRP3, MRP4, and MRP5, homologues of the multidrug resistance-associated protein gene (MRP1), in human cancer cell lines. (PubMed id 9270026)1, 2, 9 Kool M.... Borst P. (1997)
    6. The multidrug resistance protein 5 functions as an ATP-dependent export pump for cyclic nucleotides. (PubMed id 10893247)1, 7, 9 Jedlitschky G....Keppler D. (2000)
    7. Human skeletal muscle drug transporters determine loc al exposure and toxicity of statins. (PubMed id 19940267)1, 7, 9 Knauer M.J....Tirona R.G. (2010)
    8. Three novel ABCC5 splice variants in human retina and their role as regulators of ABCC5 gene expression. (PubMed id 17521428)1, 2 Stojic J.... Weber B.H. (2007)
    9. pABC11 (also known as MOAT-C and MRP5), a member of the ABC family of proteins, has anion transporter activity but does not confer multidrug resistance when overexpressed in human embryonic kidney 293 cells. (PubMed id 10438534)1, 2 McAleer M.A.... Matthews N. (1999)
    10. cDNA cloning of a short type of multidrug resistance protein homologue, SMRP, from a human lung cancer cell line. (PubMed id 9325169)1, 2 Suzuki T.... Saijo N. (1997)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 10057 HGNC: 56 AceView: ABCC5 Ensembl:ENSG00000114770 euGenes: HUgn10057
    ECgene: ABCC5 Kegg: 10057 H-InvDB: ABCC5

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for ABCC5 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for ABCC5 Genetics and Cytogenetics in Oncology and Haematology
    ABCMdbhttp://abcmutations.hegelab.org/proteinDetails?uniprot_id=O15440

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for ABCC5 gene:
    Search GeneIP for patents involving ABCC5

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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