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Aliases & Descriptions for ABCC3
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases ABC31 2 CMOAT2 3 , 5 DKFZp686E22157 2 EST90757 1 , 2 MLP2 1 , 2 , 3 , 5 MOAT-D 1 , 2 , 3 MRP3 1 , 2 , 3 , 5 cMOAT2 1 , 2
Descriptions ATP-binding cassette sub-family C member 3 3 ATP-binding cassette, sub-family C (CFTR/MRP), member 3 2 ATP-binding cassette, sub-family C, member 3 2 Multi-specific organic anion transporter D 3 Multidrug resistance-associated protein 3 3 canicular multispecific organic anion transporter 2 multidrug resistance associated protein 2
Search outside databases for aliases for ABCC3 genePrevious GC identifers: GC17P048425 GC17P051193 GC17P049054 GC17P049186
Summaries for ABCC3 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for ABCC3 : The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC)transporters. ABC proteins transport various molecules across extra- and intra-cellular membranes.ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20,White). This protein is a member of the MRP subfamily which is involved in multi-drug resistance.The specific function of this protein has not yet been determined; however, this protein may playa role in the transport of biliary and intestinal excretion of organic anions. Alternativelyspliced variants which encode different protein isoforms have been described; however, not allvariants have been fully characterized. [provided by RefSeq] UniProtKB/Swiss-Prot: MRP3_HUMAN, O15438 Function : May act as an inducible transporter in the biliary and intestinal excretion of organicanions. Acts as an alternative route for the export of bile acids and glucuronides fromcholestatic hepatocytes (By similarity)
Gene Wiki entry for ABCC3
Genomic Location for ABCC3
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the ABCC3 gene Entrez Gene cytogenetic band: 17q22 Ensembl cytogenetic band: 17q21.33 HGNC cytogenetic band: 17q21 ABCC3 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 17 GeneLoc Exon Structure
GeneLoc location for GC17P046067:
(about GC identifiers )
Start:
46,067,227 bp from pter
End:
46,124,062 bp from pter
Size:
56,836 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000017.9 NT_010783.14 Proteins for ABCC3
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: MRP3_HUMAN, O15438 (See
protein sequence )Recommended Name: Canalicular multispecific organic anion transporter 2 Size : 1527 amino acids; 169343 Da
Subcellular location : Membrane; Multi-pass membrane protein
Secondary accessions : O60265 O60922 O75621 O95078 O95289 O95290 Q9UN52Alternative splicing : 4 isoforms : O15438-1 O15438-2 O15438-3 O15438-4 (Additional isoforms seem to exist)
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001137542.1 NP_003777.2 ENSEMBL proteins: ENSP00000285238 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 3 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for ABCC3: Assays for ABCC3:
Protein
Domains/ Families for ABCC3(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry O15438 ProtoNet protein and cluster: O15438
UniProtKB/Swiss-Prot: MRP3_HUMAN, O15438 Similarity : Belongs to the ABC transporter family. Conjugate transporter (TC 3.A.1.208) subfamilySimilarity : Contains 2 ABC transmembrane type-1 domainsSimilarity : Contains 2 ABC transporter domains
Gene Function for ABCC3
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_003786 Applied Biosystems Silencer ® siRNAs for ABCC3 Sigma-Aldrich siRNA and siRNA Panels for ABCC3 Sigma-Aldrich shRNA for ABCC3 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001144070                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001144070                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001144070  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_003786 UniProtKB/Swiss-Prot: MRP3_HUMAN, O15438 Function : May act as an inducible transporter in the biliary and intestinal excretion of organicanions. Acts as an alternative route for the export of bile acids and glucuronides fromcholestatic hepatocytes (By similarity)
Genatlas biochemistry entry for ABCC3 :ATP binding cassette superfamily,subfamily C (CFTR/MRP),member 3,expressed in liver,colon,smallintestine and prostate,involved in the adrenal glands,biliary and intestinal excretion of organicanions
4 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Abcc3) :5/6 Gene Ontology (GO) molecular function terms (links to tree view) (see all 6
):
About this table
Pathways & Interactions for ABCC3
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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4 Sigma-Aldrich "Your Favorite Gene" Pathways for ABCC3 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for ABCC3 5/31 Interacting proteins for ABCC3 (ENSP00000285238 3 ) via UniProtKB, MINT, and/or STRING (see all 31
)About this table 2 Gene Ontology (GO) biological process terms (links to tree view) :
About this table
Drugs & Compounds for ABCC3 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for ABCC3 10/15 Novoseek chemical compound relationships for ABCC3 gene (see all 15
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
estradiol-17beta-glucuronide
89.51
6
10644759 (1), 14667926 (1), 12388190 (1), 12924948 (1)
etoposide glucuronide
83.64
6
11581266 (2), 12220224 (1)
5-carboxyfluorescein
70.45
3
14603501 (1), 14570758 (1)
androstane
66.44
2
14705863 (1)
glucuronide
61.57
3
14667926 (1), 14643890 (1)
bile acid
61.46
4
12220224 (1), 15814571 (1)
gamma-glutamylcysteine
46.16
2
11820781 (1), 11239498 (1)
sulfate
35.06
4
15083066 (1), 14643890 (1)
atp
34.24
4
19334674 (1), 10644759 (1), 18393293 (1)
ltc4
27.58
1
10987286 (1)
About this table 5 PharmGKB drug compound relationships for ABCC3 gene About this table
Transcripts for ABCC3(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_003786 Sigma-Aldrich siRNA and siRNA Panels for ABCC3 Sigma-Aldrich shRNA for ABCC3 Explore Sigma-Aldrich super-pooled esiRNAs
REFSEQ mRNAs for ABCC3 gene (2 alternative transcripts): NM_001144070.1 NM_003786.3
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001144070                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001144070                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001144070  
Additional cDNA sequence: AB010887.1 AB208954.1 AF009670.1 AF083552.1 AF085690.1 AF085692.1 AF104943.1 BC046126.1 BC050370.1 BC058907.1 BC104952.1 BC137347.1 BC137348.1 U66674.1 U83659.1 Y17151.2
24 DOTS entries : DT.215229 DT.100789082 DT.100789080 DT.92436625 DT.40118229 DT.95148897 DT.91940550 DT.91972802 DT.92436630 DT.70105371 DT.444291 DT.86844736 DT.91940419 DT.95082800 DT.99950674 DT.121001282 DT.121001284 DT.40303139 DT.92436622 DT.95082810 DT.95259083 DT.100705669 DT.95082805 DT.95230357
24/233 AceView cDNA sequences (see all 233
):BU543489 AF085691 AF104943 AI887269 BC046126 CB055248 AI281129 BI761935 AA843535 CB138592 Y17151 BU543427 AW195226 AI832393 BQ227366 BM795857 BQ955138 BU631704 AI282631 AI916490 BM828847 BC050370 AF154001 BU620702
highest scoring ESTs for ABCC3 :AF085692 U83659 AA159305 AA384098 AA429895 AA446044 AA484778 AA534870 AA843535 AA852507
Unigene Cluster for ABCC3: ATP-binding cassette, sub-family C (CFTR/MRP), member 3 Hs.463421 [show with all ESTs ] Unigene Representative Sequence: AF085692 GeneLoc Exon Structure 5/16 Alternative Splicing Database (ASD) splice patterns (SP) for ABCC3 (see all 16
) ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10a · 10b ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16a · 16b ^ 17a · 17b ^ 18 ^ 19 ^ 20a · SP1 :         -   -   -             -       -                       SP2 :         -   -   -                   -                       SP3 :         -   -   -             -       -                       SP4 :         -   -   -             -       -                       SP5 :                                                    
ExUns: 20b ^ 21 ^ 22 ^ 23a · 23b · 23c · 23d ^ 24a · 24b · 24c ^ 25 ^ 26a · 26b · 26c ^ 27 ^ 28a · 28b ^ 29a · 29b ^ 30 ^ 31a · 31b ^ 32a · 32b ^ 33a · 33b ^ SP1 :             -                             -     -       -   SP2 :             -                             -     -       -   SP3 :             -                             -     -       -   SP4 :                                                     SP5 :                                 -                    
ExUns: 34 ^ 35a · 35b · 35c ^ 36 ^ 37a · 37b · 37c · 37d SP1 :   -   -     -           SP2 :   -   -     -           SP3 :   -   -     -           SP4 :                   SP5 :                  
About this scheme ECgene alternative splicing isoforms for ABCC3 1 Ensembl transcript including schematic representation : ENST00000285238
Expression for ABCC3
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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ABCC3 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for ABCC3 1 / 2 / 3
16 probe-sets matching ABCC3 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GTCAACAGTASOURCE GeneReport for Unigene cluster: Hs.463421 Expression variation in blood from EXPOLDB for ABCC3
UniProtKB/Swiss-Prot: MRP3_HUMAN, O15438 Tissue specificity : Mainly expressed in the liver. Also expressed in small intestine, colon,prostate, testis, brain and at a lower level in the kidney
Orthologs for ABCC3
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for ABCC3 gene from 5/11 species (see all 11
)
Organism
Gene
Locus
Description
Human Similarity
NCBI accessions
dog (Canis familiaris)
ABCC31
--
ATP-binding cassette, sub-family C (CFTR/MRP), member more
86.33(n) 84.82(a)
491084 XM_548204.2 XP_548204.2
chimpanzee (Pan troglodytes)
ABCC31
--
ATP-binding cassette, sub-family C (CFTR/MRP), member more
99.14(n) 98.74(a)
747938 XM_001158914.1 XP_001158914.1
cow (Bos taurus)
ABCC31
--
ATP-binding cassette, sub-family C (CFTR/MRP), member more
85.76(n) 84.75(a)
533151 XM_612461.3 XP_612461.3
rat (Rattus norvegicus)
Abcc31
--
ATP-binding cassette, sub-family C (CFTR/MRP), member more
81.63(n) 79.63(a)
140668 NM_080581.1 NP_542148.1
mouse (Mus musculus)
Abcc31 , 5
115
ATP-binding cassette, sub-family C (CFTR/MRP), member more 1, 5
82.42(n) 1 81.07(a) 1
76408 1 NM_029600.3 1 NP_083876.3 1 AF534127 5 AF534128 5 (see all 19 )
About this table Species with no ortholog for ABCC3 ENSEMBL Gene Tree for ABCC3 Paralogs for ABCC3 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for ABCC3 gene ABCC6 2 ABCC1 2 ABCC2 2
SNPs/Variants for ABCC3 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for ABCC3 (up to first 250kb)
Disorders & Mutations for ABCC3
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 604323 10/28 Novoseek disease relationships for ABCC3 gene (see all 28
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
dubin-johnson syndrome
72.06
1
10094960 (1)
cholestasis
68.43
10
12837754 (1), 11850532 (1), 12538803 (1), 10728790 (1) (see all 7 )
cholestasis extrahepatic
58.42
4
11076395 (1), 12428063 (1), 19185005 (1)
breast cancer
38.81
19
12731885 (2), 18393293 (2), 10739113 (1), 14979731 (1) (see all 16 )
biliary cirrhosis primary
36.27
2
14568249 (1)
hepatocellular carcinoma
33.84
7
18250047 (3), 18619700 (2), 14599947 (1), 11745434 (1)
cancer
33.37
11
9270026 (1), 10359813 (1), 12676459 (1), 10100721 (1) (see all 11 )
glioma
31.36
11
11223551 (5), 16193381 (4)
colon adenocarcinoma
29.94
1
17430634 (1)
nsclc
25.92
10
11410522 (2), 15014021 (1), 19345732 (1)
About this table 1 PharmGKB disease relationship for ABCC3 gene About this table Human Gene Mutation Database : ABCC3 Human Genome Epidemiology Navigator: ABCC3 (5 documents)
Medical News for ABCC3 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for ABCC3 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/215 PubMed articles for ABCC3 gene (see all 215
): Characterization of MOAT-C and MOAT-D, new members of the MRP/cMOAT subfamily of transporter proteins. (PubMed id 9827529) 1, 2, 3, 4 Belinsky M.G....Kruh G.D. (1998) Characterization of the human multidrug resistance protein isoform MRP3 localized to the basolateral hepatocyte membrane. (PubMed id 10094960) 1, 3, 4 Koenig J.... Keppler D. (1999) cDNA cloning and inducible expression of human multidrug resistance associated protein 3 (MRP3). (PubMed id 9738950) 1, 3, 4 Kiuchi Y.... Sugiyama Y. (1998) Analysis of expression of cMOAT (MRP2), MRP3, MRP4, and MRP5, homologues of the multidrug resistance-associated protein gene (MRP1), in human cancer cell lines. (PubMed id 9270026) 1, 3, 4 Kool M.... Borst P. (1997) An unappreciated role for RNA surveillance. (PubMed id 14759258) 3, 4 Hillman R.T.... Brenner S.E. (2004) Transport of methotrexate (MTX) and folates by multidrug resistance protein (MRP) 3 and MRP1: effect of polyglutamylation on MTX transport. (PubMed id 11585759) 1, 7 Zeng H....Kruh G.D. (2001) Characterization of drug transport by the human multidrug resistance protein 3 (ABCC3). (PubMed id 11581266) 1, 7 Zelcer N....Borst P. (2001) Human MRP3 transporter: identification of the 5'-flanking region, genomic organization and alternative splice variants. (PubMed id 9889399) 3, 4 Fromm M.F.... Kim R.B. (1999) Isolation of a novel human canalicular multispecific organic anion transporter, cMOAT2/MRP3, and its expression in cisplatin-resistant cancer cells with decreased ATP-dependent drug transport. (PubMed id 9813153) 3, 4 Uchiumi T.... Kuwano M. (1998) Characterization of the human ABC superfamily: isolation and mapping of 21 new genes using the expressed sequence tags database. (PubMed id 8894702) 2, 3 Allikmets R....Dean M. (1996)
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