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Aliases & Descriptions for ABCC1
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases ABC29 2 ABCC 2 DKFZp686N04233 2 DKFZp781G125 2 GS-X 1 , 2 MRP 2 , 3 , 5 MRP1 2 , 3 , 5 OTTHUMP00000045904 2
Descriptions ATP-binding cassette sub-family C member 1 3 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 2 ATP-binding cassette, sub-family C, member 1 2 LTC4 transporter 2 , 3 Leukotriene C(4) transporter 2 , 3 multidrug resistance protein 2 multiple drug resistance protein 1 2 multiple drug resistance-associated protein 2
Search outside databases for aliases for ABCC1 genePrevious GC identifers: GC16P015870 GC16P015325 GC16P016009
Summaries for ABCC1 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for ABCC1 : The protein encoded by this gene is a member of the superfamily of ATP-binding cassette (ABC)transporters. ABC proteins transport various molecules across extra-and intra-cellular membranes.ABC genes are divided into seven distinct subfamilies (ABC1, MDR/TAP, MRP, ALD, OABP, GCN20,White). This full transporter is a member of the MRP subfamily which is involved in multi-drugresistance. This protein functions as a multispecific organic anion transporter, with oxidizedglutatione, cysteinyl leukotrienes, and activated aflatoxin B1 as substrates. This protein alsotransports glucuronides and sulfate conjugates of steroid hormones and bile salts. Alternativesplicing by exon deletion results in several splice variants but maintains the original openreading frame in all forms. [provided by RefSeq] UniProtKB/Swiss-Prot: MRP1_HUMAN, P33527 Function : Mediates export of organic anions and drugs from the cytoplasm. Mediates ATP-dependenttransport of glutathione and glutathione conjugates, leukotriene C4,estradiol-17-beta-o-glucuronide, methotrexate, antiviral drugs and other xenobiotics. Confersresistance to anticancer drugs. Hydrolyzes ATP with low efficiency
Gene Wiki entry for ABCC1
Genomic Location for ABCC1
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the ABCC1 gene Entrez Gene cytogenetic band: 16p13.1 Ensembl cytogenetic band: 16p13.11 HGNC cytogenetic band: 16p13.1 ABCC1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 16 GeneLoc Exon Structure
GeneLoc location for GC16P015950:
(about GC identifiers )
Start:
15,950,935 bp from pter
End:
16,144,432 bp from pter
Size:
193,498 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000016.8 NT_010393.15 Proteins for ABCC1
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: MRP1_HUMAN, P33527 (See
protein sequence )Recommended Name: Multidrug resistance-associated protein 1 Size : 1531 amino acids; 171561 Da
Subcellular location : Cell membrane; Multi-pass membrane protein
PDB structures from and Proteopedia : 2CBZ (3D)
 
Secondary accessions : A3RJX2 O14819 O43333 P78419 Q59GI9 Q9UQ97 Q9UQ99 Q9UQA0Alternative splicing : 9 isoforms : P33527-1 P33527-2 P33527-3 P33527-4 P33527-5 P33527-6 P33527-7 P33527-8 P33527-9 (Additional isoforms seem to exist. Experimental confirmation may be lacking for some isoforms)
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (5 alternative transcripts):
NP_004987.2 NP_063915.2 NP_063953.2 NP_063954.2 NP_063955.2 ENSEMBL proteins: ENSP00000382342 ENSP00000382340 ENSP00000263018 ENSP00000263015 ENSP00000263019 ENSP00000263017 ENSP00000263014 ENSP00000263016 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 3 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for ABCC1: Invitrogen Antibodies for ABCC1 Millipore Mono- and Polyclonal Antibodies for the study of ABCC1 Sigma-Aldrich Antibody Arrays and Antibodies for ABCC1 R&D Systems Antibodies for ABCC1 (MRP1) Antibodies from Abcam (MRP1 ), each with their Abpromise SM Monoclonal and Polyclonal Antibodies from Abnova (ABCC1 ) Novus Biologicals Antibody for ABCC1
Assays for ABCC1:
Protein
Domains/ Families for ABCC1(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P33527 ProtoNet protein and cluster: P33527
UniProtKB/Swiss-Prot: MRP1_HUMAN, P33527 Similarity : Belongs to the ABC transporter family. Conjugate transporter (TC 3.A.1.208) subfamilySimilarity : Contains 2 ABC transmembrane type-1 domainsSimilarity : Contains 2 ABC transporter domains
Gene Function for ABCC1
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 7 ): NM_004996 Applied Biosystems Silencer ® siRNAs for ABCC1 Sigma-Aldrich siRNA and siRNA Panels for ABCC1 Sigma-Aldrich shRNA for ABCC1 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 5 ): NM_004996                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 5 ): NM_004996                                  untagged cDNA clones in CMV expression vector (see all 7 ): NM_004996  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_004996 UniProtKB/Swiss-Prot: MRP1_HUMAN, P33527 Function : Mediates export of organic anions and drugs from the cytoplasm. Mediates ATP-dependenttransport of glutathione and glutathione conjugates, leukotriene C4,estradiol-17-beta-o-glucuronide, methotrexate, antiviral drugs and other xenobiotics. Confersresistance to anticancer drugs. Hydrolyzes ATP with low efficiency
Genatlas biochemistry entry for ABCC1 :ATP binding cassettte superfamily,subfamily C (CFTR/MRP),member 1,ubiquitously expressed,withseveral alternatively spliced forms,also containing a CGG repeat in 5'utr
5 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Abcc1) :5 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for ABCC1
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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3 Sigma-Aldrich "Your Favorite Gene" Pathways for ABCC1 (Your Favorite Gene powered by Ingenuity) Gene Network CentralTM Interacting Genes and Proteins Network for ABCC1 2 Gene Ontology (GO) biological process terms (links to tree view) :
About this table
Drugs & Compounds for ABCC1 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Sigma-Aldrich Small Molecules for ABCC1:Inhibitor
Compounds for ABCC1 available from Tocris Bioscience Compound Action
CAS
number MK 571 Potent CysLT1 (LTD4) inverse agonist. Also MRP inhibitor [115104-28-4]
About this table 10/31 Novoseek chemical compound relationships for ABCC1 gene (see all 31
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
(glc)4
90.94
66
10427142 (3), 11810759 (3), 10408915 (2), 11159731 (2) (see all 33 )
estradiol-17beta-glucuronide
89.69
32
12388549 (2), 9281595 (2), 11278596 (1), 11278867 (1) (see all 22 )
rhodamine 123
83.98
60
10955805 (2), 9713968 (2), 11288109 (2), 15120939 (2) (see all 31 )
sb 30
83.71
9
11159731 (2), 10329417 (2), 10427142 (2), 11331074 (1) (see all 6 )
biricodar
82.09
9
11408511 (2), 9738565 (2), 12217752 (1), 12721757 (1) (see all 5 )
gf 120918
79.11
12
10917553 (2), 11189941 (2), 15359574 (1), 11118294 (1) (see all 6 )
s-(2,4-dinitrophenyl)glutathione
77.96
5
10077229 (1), 9762421 (1), 12950253 (1), 8692921 (1) (see all 5 )
etoposide glucuronide
76.44
1
8869738 (1)
ly335979
76.32
2
12455064 (1), 10411602 (1)
ltc4
74.82
81
8621643 (5), 12682044 (4), 11898391 (3), 8910374 (3) (see all 30 )
About this table 10/16 PharmGKB drug compound relationships for ABCC1 gene (see all 16
)About this table
Transcripts for ABCC1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
OriGene , Expression Assays from Applied Biosystems )About This Section
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 7 ): NM_004996 Sigma-Aldrich siRNA and siRNA Panels for ABCC1 Sigma-Aldrich shRNA for ABCC1 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_004996 NM_019862 NM_019898 NM_019899 NM_019900
REFSEQ mRNAs for ABCC1 gene (5 alternative transcripts): NM_004996.3 NM_019862.2 NM_019898.2 NM_019899.2 NM_019900.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_004996 NM_019862 NM_019898 NM_019899 NM_019900
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 5 ): NM_004996                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 5 ): NM_004996                                  untagged cDNA clones in CMV expression vector (see all 7 ): NM_004996  
Additional cDNA sequence: AB209120.1 AJ003198.1 AK097871.1 AK311015.1 BC001636.1 BX648866.1 CR749835.1 L05628.1 X78338.1
24/26 DOTS entries (see all 26
): DT.100817334 DT.101983347 DT.444581 DT.97799615 DT.102841888 DT.102841978 DT.120692263 DT.102841295 DT.100817332 DT.120692056 DT.120692138 DT.99930223 DT.92040146 DT.99929967 DT.92015144 DT.120691986 DT.40131770 DT.91757212 DT.92024320 DT.92050254 DT.95074693 DT.95257421 DT.95294943 DT.100863932
24/200 AceView cDNA sequences (see all 200
):BM799798 BM193098 R63723 BM145377 BM678021 BC001636 AI224066 AI648621 AW270744 CA488065 AI798255 AA424804 BU176528 BM738288 AI696452 AL706199 AL043477 AA412168 BX280480 BQ434553 Z39651 CF272373 BG698823 X78338
highest scoring ESTs for ABCC1 :L05628 X78338 AA133518 AA306323 AA311707 AA312126 AA328314 AA399068 AA495876 AI123076
Unigene Cluster for ABCC1: ATP-binding cassette, sub-family C (CFTR/MRP), member 1 Hs.709181 [show with all ESTs ] Unigene Representative Sequence: NM_004996 GeneLoc Exon Structure 4 Alternative Splicing Database (ASD) splice patterns (SP) for ABCC1 ExUns: 1 ^ 2a · 2b ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14a · 14b ^ 15a · 15b ^ 16 ^ 17 ^ 18 ^ 19 ^ 20a · 20b ^ 21 ^ 22 ^ SP1 :                             -               -       -     SP2 :                             -                     -     SP3 :                                                     SP4 :                                                    
ExUns: 23 ^ 24a · 24b ^ 25 ^ 26 ^ 27 ^ 28 ^ 29 ^ 30 ^ 31 ^ 32a · 32b SP1 :                         SP2 :                         SP3 :                         SP4 :                        
About this scheme ECgene alternative splicing isoforms for ABCC1 8 Ensembl transcripts including schematic representations : ENST00000399410
ENST00000399408
ENST00000349532
ENST00000353257
ENST00000346370
ENST00000351154
ENST00000345148
ENST00000349029
Expression for ABCC1
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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ABCC1 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for ABCC1 1 / 2 / 3
8 probe-sets matching ABCC1 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GTTATGAAGCSOURCE GeneReport for Unigene cluster: Hs.709181 Expression variation in blood from EXPOLDB for ABCC1
UniProtKB/Swiss-Prot: MRP1_HUMAN, P33527 Tissue specificity : Lung, testis and peripheral blood mononuclear cells
Orthologs for ABCC1
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for ABCC1 gene from 5/23 species (see all 23
)
Organism
Gene
Locus
Description
Human Similarity
NCBI accessions
dog (Canis familiaris)
ABCC11
--
ATP-binding cassette, sub-family C (CFTR/MRP), member more
88.63(n) 91.64(a)
403453 NM_001002971.1 NP_001002971.1
chimpanzee (Pan troglodytes)
ABCC11
--
ATP-binding cassette, sub-family C (CFTR/MRP), member more
98.91(n) 99.41(a)
453952 XM_001145351.1 XP_001145351.1
cow (Bos taurus)
ABCC11
--
ATP-binding cassette, sub-family C (CFTR/MRP), member more
88.76(n) 90.78(a)
281588 NM_174223.1 NP_776648.1
rat (Rattus norvegicus)
Abcc11
--
ATP-binding cassette, sub-family C (CFTR/MRP), member more
83.03(n) 87.58(a)
24565 NM_022281.2 NP_071617.2
mouse (Mus musculus)
Abcc11 , 5
165
ATP-binding cassette, sub-family C (CFTR/MRP), member more 1, 5
83.84(n) 1 88.47(a) 1
17250 1 NM_008576.2 1 NP_032602.1 1 AA473585 5 AF022908 5 (see all 19 )
About this table Species with no ortholog for ABCC1 ENSEMBL Gene Tree for ABCC1 Paralogs for ABCC1 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for ABCC1 gene ABCC3 2 ABCC6 2 ABCC2 2
SNPs/Variants for ABCC1 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for ABCC1 (up to first 250kb)
Disorders & Mutations for ABCC1
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 158343 10/88 Novoseek disease relationships for ABCC1 gene (see all 88
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
dubin-johnson syndrome
72.38
8
8621134 (4), 10695015 (1), 8869738 (1)
cancer
64.42
248
9762421 (5), 8881943 (5), 9815925 (4), 11245443 (4) (see all 99 )
leukemia
64.23
107
8833393 (4), 7803281 (3), 10901300 (3), 9603996 (3) (see all 68 )
breast cancer
63.63
234
15517899 (4), 10697508 (4), 14659356 (4), 15718312 (4) (see all 99 )
tumors
63.27
442
15269137 (6), 17359940 (5), 15838832 (5), 9182980 (5) (see all 99 )
colchicine resistance
57.18
1
9649117 (1)
cancer lung
55.53
115
11585860 (5), 8647646 (5), 11410522 (5), 11776768 (5) (see all 60 )
secondary aml
51.98
3
8618469 (1), 11167822 (1), 18418409 (1)
pseudoxanthoma elasticum
51.72
6
11139250 (2), 11439001 (1), 12414644 (1), 16006996 (1)
small cell lung cancer
51.69
34
9751266 (2), 16883578 (2), 15880572 (2), 8185674 (1) (see all 24 )
About this table 2 PharmGKB disease relationships for ABCC1 gene About this table Human Gene Mutation Database : ABCC1 Genetic Association Database: ABCC1 Human Genome Epidemiology Navigator: ABCC1 (17 documents)
Medical News for ABCC1 (Possibly Related Articles in
Doctor's Guide )
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--
Publications for ABCC1 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/1307 PubMed articles for ABCC1 gene (see all 1307
): Loss of multidrug resistance protein 1 expression and folate efflux activity results in a highly concentrative folate transport in human leukemia cells. (PubMed id 12486126) 1, 3, 7 Assaraf Y.G....Jansen G. (2003) The human multidrug resistance-associated protein MRP is a plasma membrane drug-efflux pump. (PubMed id 7916458) 1, 3, 7 Zaman G.J....Broxterman H.J. (1994) Multidrug resistance-associated protein: sequence correction. (PubMed id 8098549) 2, 3, 4 Cole S.P.C. and Deeley R.G. (1993) Overexpression of a transporter gene in a multidrug-resistant human lung cancer cell line. (PubMed id 1360704) 2, 3, 4 Cole S.P....Deeley R.G. (1992) Mutational analysis of ionizable residues proximal to the cytoplasmic interface of membrane spanning domain 3 of the multidrug resistance protein, MRP1 (ABCC1): glutamate 1204 is important for both the expression and catalytic activity of the transporter. (PubMed id 15208328) 1, 3, 4 Situ D.... Cole S.P.C. (2004) Membrane topology of the multidrug resistance protein (MRP). A study of glycosylation-site mutants reveals an extracytosolic NH2 terminus. (PubMed id 9295302) 1, 3, 4 Hipfner D.R.... Cole S.P.C. (1997) Identification of an amino acid residue in multidrug resistance protein 1 critical for conferring resistance to anthracyclines. (PubMed id 11278596) 1, 3, 4 Zhang D.-W.... Deeley R.G. (2001) Influence of ABCB1, ABCC1, ABCC2, and ABCG2 haplotypes on the cellular exposure of nelfinavir in vivo. (PubMed id 16041239) 1, 3, 6 Colombo S....Telenti A. (2005) Transmembrane helix 11 of multidrug resistance protein 1 (MRP1/ABCC1): identification of polar amino acids important for substrate specificity and binding of ATP at nucleotide binding domain 1. (PubMed id 15260484) 1, 3, 4 Zhang D.-W....Deeley R.G. (2004) Identification of novel polymorphisms in the pM5 and MRP1 (ABCC1) genes at locus 16p13.1 and exclusion of both genes as responsible for pseudoxanthoma elasticum. (PubMed id 11139250) 1, 3, 4 Perdu J. and Germain D.P. (2001)
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-- Services for ABCC1 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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