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Aliases for AAMDC Gene

Aliases for AAMDC Gene

  • Adipogenesis Associated, Mth938 Domain Containing 2 3
  • Adipogenesis Associated Mth938 Domain-Containing Protein 3 4
  • C11orf67 3 4
  • Chromosome 11 Open Reading Frame 67 2
  • Mth938 Domain-Containing Protein 3
  • UPF0366 Protein C11orf67 3
  • PTD015 3
  • CK067 3

External Ids for AAMDC Gene

Previous Symbols for AAMDC Gene

  • C11orf67

Summaries for AAMDC Gene

GeneCards Summary for AAMDC Gene

AAMDC (Adipogenesis Associated, Mth938 Domain Containing) is a Protein Coding gene.

UniProtKB/Swiss-Prot for AAMDC Gene

  • May play a role in preadipocyte differentiation and adipogenesis.

No data available for Entrez Gene Summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AAMDC Gene

Genomics for AAMDC Gene

Genomic Location for AAMDC Gene

Start:
77,821,109 bp from pter
End:
77,918,432 bp from pter
Size:
97,324 bases
Orientation:
Plus strand

Genomic View for AAMDC Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for AAMDC Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AAMDC Gene

No data available for Regulatory Elements for AAMDC Gene

Proteins for AAMDC Gene

  • Protein details for AAMDC Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H7C9-AAMDC_HUMAN
    Recommended name:
    Mth938 domain-containing protein
    Protein Accession:
    Q9H7C9
    Secondary Accessions:
    • Q96AQ4
    • Q9Y6B1

    Protein attributes for AAMDC Gene

    Size:
    122 amino acids
    Molecular mass:
    13332 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for AAMDC Gene

    Alternative splice isoforms for AAMDC Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for AAMDC Gene

Proteomics data for AAMDC Gene at MOPED

Post-translational modifications for AAMDC Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

No data available for DME Specific Peptides for AAMDC Gene

Domains for AAMDC Gene

Protein Domains for AAMDC Gene

UniProtKB/Swiss-Prot:

AAMDC_HUMAN
Family:
  • Belongs to the AAMDC family.:
    • Q9H7C9
genes like me logo Genes that share domains with AAMDC: view

No data available for Gene Families for AAMDC Gene

Function for AAMDC Gene

Molecular function for AAMDC Gene

UniProtKB/Swiss-Prot Function: May play a role in preadipocyte differentiation and adipogenesis.

Gene Ontology (GO) - Molecular Function for AAMDC Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding IPI 25416956
genes like me logo Genes that share ontologies with AAMDC: view

Phenotypes for AAMDC Gene

GenomeRNAi human phenotypes for AAMDC:
genes like me logo Genes that share phenotypes with AAMDC: view

miRNA for AAMDC Gene

miRTarBase miRNAs that target AAMDC

No data available for Enzyme Numbers (IUBMB) , Animal Models , Transcription Factor Targeting and HOMER Transcription for AAMDC Gene

Localization for AAMDC Gene

Subcellular locations from UniProtKB/Swiss-Prot for AAMDC Gene

Cytoplasm. Note=Diffuse distribution with some highly concentrated spots around the nucleus. {ECO:0000250}.

Gene Ontology (GO) - Cellular Components for AAMDC Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005737 cytoplasm ISS --
genes like me logo Genes that share ontologies with AAMDC: view

Pathways for AAMDC Gene

SuperPathways for AAMDC Gene

No Data Available

Gene Ontology (GO) - Biological Process for AAMDC Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0043066 negative regulation of apoptotic process IBA --
GO:0045600 positive regulation of fat cell differentiation IBA --
GO:0045944 positive regulation of transcription from RNA polymerase II promoter IBA --
genes like me logo Genes that share ontologies with AAMDC: view

No data available for Pathways by source for AAMDC Gene

Transcripts for AAMDC Gene

Unigene Clusters for AAMDC Gene

Adipogenesis associated, Mth938 domain containing:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for AAMDC Gene

ExUns: 1a · 1b · 1c · 1d ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6
SP1: - -
SP2: - - -
SP3: - - -
SP4:

Relevant External Links for AAMDC Gene

GeneLoc Exon Structure for
AAMDC
ECgene alternative splicing isoforms for
AAMDC

Expression for AAMDC Gene

mRNA expression in normal human tissues for AAMDC Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for AAMDC Gene

SOURCE GeneReport for Unigene cluster for AAMDC Gene Hs.745040

genes like me logo Genes that share expressions with AAMDC: view

Orthologs for AAMDC Gene

This gene was present in the common ancestor of chordates.

Orthologs for AAMDC Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia AAMDC 37
  • 73 (a)
OneToOne
C11H11orf67 36
  • 99.73 (n)
  • 100 (a)
cow
(Bos Taurus)
Mammalia AAMDC 36
  • 90.71 (n)
  • 89.34 (a)
AAMDC 37
  • 89 (a)
OneToOne
dog
(Canis familiaris)
Mammalia AAMDC 36
  • 92.35 (n)
  • 87.7 (a)
AAMDC 37
  • 88 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Aamdc 36
  • 90.71 (n)
  • 91.8 (a)
Aamdc 16
Aamdc 37
  • 75 (a)
OneToOne
oppossum
(Monodelphis domestica)
Mammalia AAMDC 37
  • 84 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Aamdc 36
  • 90.16 (n)
  • 89.34 (a)
chicken
(Gallus gallus)
Aves C1H11ORF67 36
  • 80.6 (n)
  • 86.07 (a)
C1H11ORF67 37
  • 86 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia AAMDC 37
  • 82 (a)
OneToOne
zebrafish
(Danio rerio)
Actinopterygii aamdc 36
  • 70.49 (n)
  • 76.23 (a)
aamdc 37
  • 76 (a)
OneToOne
Species with no ortholog for AAMDC:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for AAMDC Gene

ENSEMBL:
Gene Tree for AAMDC (if available)
TreeFam:
Gene Tree for AAMDC (if available)

Paralogs for AAMDC Gene

genes like me logo Genes that share paralogs with AAMDC: view

No data available for Paralogs for AAMDC Gene

Variants for AAMDC Gene

Sequence variations from dbSNP and Humsavar for AAMDC Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs635195 -- 77,863,591(-) GCCAA(C/G)ATAGT intron-variant
rs636971 -- 77,863,203(-) GGTTC(A/G)TCCTA intron-variant
rs647235 -- 77,855,803(-) AATTT(C/T)TAAGC intron-variant
rs648896 -- 77,840,454(-) CCTCC(A/G)GGGTT intron-variant
rs649671 -- 77,839,734(+) GAACA(C/G)CACAT intron-variant

Relevant External Links for AAMDC Gene

HapMap Linkage Disequilibrium report
AAMDC

No data available for Structural Variations from Database of Genomic Variants (DGV) for AAMDC Gene

Disorders for AAMDC Gene

No disorders were found for AAMDC Gene.

No data available for UniProtKB/Swiss-Prot for AAMDC Gene

Publications for AAMDC Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4
  4. hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes. (PMID: 17207965) Lamesch P. … Vidal M. (Genomics 2007) 3
  5. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3

Products for AAMDC Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate AAMDC
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for AAMDC
    • Block miRNA regulation of AAMDC using miScript Target Protectors

    Sources for AAMDC Gene

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