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Aliases for AADACL4 Gene

Aliases for AADACL4 Gene

  • Arylacetamide Deacetylase-Like 4 2 3 5
  • EC 3.1.1.- 4

External Ids for AADACL4 Gene

Previous GeneCards Identifiers for AADACL4 Gene

  • GC01P011857

Summaries for AADACL4 Gene

GeneCards Summary for AADACL4 Gene

AADACL4 (Arylacetamide Deacetylase-Like 4) is a Protein Coding gene. GO annotations related to this gene include hydrolase activity and carboxylic ester hydrolase activity. An important paralog of this gene is AADAC.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AADACL4 Gene

Genomics for AADACL4 Gene

Regulatory Elements for AADACL4 Gene

Enhancers for AADACL4 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around AADACL4 on UCSC Golden Path with GeneCards custom track

Genomic Location for AADACL4 Gene

Chromosome:
1
Start:
12,644,547 bp from pter
End:
12,667,086 bp from pter
Size:
22,540 bases
Orientation:
Plus strand

Genomic View for AADACL4 Gene

Genes around AADACL4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
AADACL4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for AADACL4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AADACL4 Gene

Proteins for AADACL4 Gene

  • Protein details for AADACL4 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q5VUY2-ADCL4_HUMAN
    Recommended name:
    Arylacetamide deacetylase-like 4
    Protein Accession:
    Q5VUY2

    Protein attributes for AADACL4 Gene

    Size:
    407 amino acids
    Molecular mass:
    46082 Da
    Quaternary structure:
    No Data Available

neXtProt entry for AADACL4 Gene

Proteomics data for AADACL4 Gene at MOPED

Post-translational modifications for AADACL4 Gene

  • Glycosylation at Asn 168 and Asn 269
  • Modification sites at PhosphoSitePlus

Other Protein References for AADACL4 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for AADACL4 Gene

Domains & Families for AADACL4 Gene

Gene Families for AADACL4 Gene

Protein Domains for AADACL4 Gene

Suggested Antigen Peptide Sequences for AADACL4 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q5VUY2

UniProtKB/Swiss-Prot:

ADCL4_HUMAN :
  • Belongs to the GDXG lipolytic enzyme family.
Family:
  • Belongs to the GDXG lipolytic enzyme family.
genes like me logo Genes that share domains with AADACL4: view

Function for AADACL4 Gene

Enzyme Numbers (IUBMB) for AADACL4 Gene

Gene Ontology (GO) - Molecular Function for AADACL4 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0052689 carboxylic ester hydrolase activity IEA --
genes like me logo Genes that share ontologies with AADACL4: view
genes like me logo Genes that share phenotypes with AADACL4: view

Animal Model Products

CRISPR Products

No data available for Molecular function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for AADACL4 Gene

Localization for AADACL4 Gene

Subcellular locations from UniProtKB/Swiss-Prot for AADACL4 Gene

Membrane; Single-pass type II membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for AADACL4 Gene COMPARTMENTS Subcellular localization image for AADACL4 gene
Compartment Confidence
golgi apparatus 1
plasma membrane 1

No data available for Gene Ontology (GO) - Cellular Components for AADACL4 Gene

Pathways & Interactions for AADACL4 Gene

SuperPathways for AADACL4 Gene

No Data Available

Interacting Proteins for AADACL4 Gene

Gene Ontology (GO) - Biological Process for AADACL4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for AADACL4 Gene

Drugs & Compounds for AADACL4 Gene

No Compound Related Data Available

Transcripts for AADACL4 Gene

mRNA/cDNA for AADACL4 Gene

(5) REFSEQ mRNAs :
(0) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for AADACL4 Gene

Arylacetamide deacetylase-like 4:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for AADACL4 Gene

No ASD Table

Relevant External Links for AADACL4 Gene

GeneLoc Exon Structure for
AADACL4
ECgene alternative splicing isoforms for
AADACL4

Expression for AADACL4 Gene

mRNA expression in normal human tissues for AADACL4 Gene

mRNA differential expression in normal tissues according to GTEx for AADACL4 Gene

This gene is overexpressed in Vagina (x8.2), Adipose - Visceral (Omentum) (x6.3), Kidney - Cortex (x4.9), and Prostate (x4.3).

SOURCE GeneReport for Unigene cluster for AADACL4 Gene Hs.209954

genes like me logo Genes that share expression patterns with AADACL4: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for AADACL4 Gene

Orthologs for AADACL4 Gene

This gene was present in the common ancestor of animals.

Orthologs for AADACL4 Gene

Organism Taxonomy Gene Similarity Type Details
cow
(Bos Taurus)
Mammalia AADACL4 35
  • 79.03 (n)
  • 69.78 (a)
dog
(Canis familiaris)
Mammalia AADACL4 35
  • 77.58 (n)
  • 68.54 (a)
AADACL4 36
  • 63 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm13177 35
  • 71.99 (n)
  • 65.11 (a)
Gm13177 16
9430007A20Rik 36
  • 61 (a)
OneToMany
Gm13124 36
  • 59 (a)
OneToMany
Gm13177 36
  • 65 (a)
OneToMany
Gm13178 36
  • 64 (a)
OneToMany
Gm436 36
  • 65 (a)
OneToMany
Gm438 36
  • 61 (a)
OneToMany
chimpanzee
(Pan troglodytes)
Mammalia AADACL4 35
  • 99.26 (n)
  • 99.02 (a)
AADACL4 36
  • 98 (a)
OneToOne
rat
(Rattus norvegicus)
Mammalia Aadacl4 35
  • 71.74 (n)
  • 64.13 (a)
oppossum
(Monodelphis domestica)
Mammalia -- 36
  • 53 (a)
OneToMany
platypus
(Ornithorhynchus anatinus)
Mammalia -- 36
  • 41 (a)
OneToMany
chicken
(Gallus gallus)
Aves AADACL4 35
  • 56.73 (n)
  • 48.52 (a)
-- 36
  • 42 (a)
ManyToMany
-- 36
  • 44 (a)
ManyToMany
-- 36
  • 40 (a)
ManyToMany
-- 36
  • 46 (a)
ManyToMany
-- 36
  • 40 (a)
ManyToMany
lizard
(Anolis carolinensis)
Reptilia -- 36
  • 42 (a)
ManyToMany
-- 36
  • 41 (a)
ManyToMany
-- 36
  • 42 (a)
ManyToMany
-- 36
  • 42 (a)
ManyToMany
-- 36
  • 41 (a)
ManyToMany
-- 36
  • 40 (a)
ManyToMany
-- 36
  • 44 (a)
ManyToMany
-- 36
  • 42 (a)
ManyToMany
-- 36
  • 41 (a)
ManyToMany
-- 36
  • 42 (a)
ManyToMany
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100492051 35
  • 53.78 (n)
  • 49.22 (a)
zebrafish
(Danio rerio)
Actinopterygii aadacl4 35
  • 49.92 (n)
  • 38.92 (a)
aadacl4 36
  • 37 (a)
OneToMany
worm
(Caenorhabditis elegans)
Secernentea F16F9.4 36
  • 23 (a)
ManyToMany
T09B9.1 36
  • 21 (a)
ManyToMany
trcs-1 36
  • 20 (a)
ManyToMany
Y43F8A.3 36
  • 22 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 36
  • 24 (a)
OneToMany
Species with no ortholog for AADACL4:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for AADACL4 Gene

ENSEMBL:
Gene Tree for AADACL4 (if available)
TreeFam:
Gene Tree for AADACL4 (if available)

Paralogs for AADACL4 Gene

Paralogs for AADACL4 Gene

(3) SIMAP similar genes for AADACL4 Gene using alignment to 2 proteins:

Pseudogenes.org Pseudogenes for AADACL4 Gene

genes like me logo Genes that share paralogs with AADACL4: view

Variants for AADACL4 Gene

Sequence variations from dbSNP and Humsavar for AADACL4 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs1419298 -- 12,665,932(-) ACTAC(A/G)CCAGT intron-variant
rs1539699 -- 12,662,400(-) CTTGC(C/G)CATCA intron-variant
rs1539700 -- 12,652,416(-) GGGAC(A/T)GTTGA intron-variant
rs1539701 -- 12,652,354(-) AAGGG(C/T)ATCTT intron-variant
rs1539702 -- 12,651,751(-) ctggg(A/G)tgcaa intron-variant

Structural Variations from Database of Genomic Variants (DGV) for AADACL4 Gene

Variant ID Type Subtype PubMed ID
essv17144 CNV CNV 17122850
dgv20e1 CNV Complex 17122850
dgv145n71 CNV Gain 21882294
dgv21e1 CNV Complex 17122850
nsv428410 CNV Gain+Loss 18775914
nsv871219 CNV Gain 21882294
nsv515525 CNV Loss 19592680

Variation tolerance for AADACL4 Gene

Residual Variation Intolerance Score: 56.6% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.41; 27.77% of all genes are more intolerant (likely to be disease-causing)

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Relevant External Links for AADACL4 Gene

Disorders for AADACL4 Gene

Relevant External Links for AADACL4

Genetic Association Database (GAD)
AADACL4
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
AADACL4

No disorders were found for AADACL4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for AADACL4 Gene

Publications for AADACL4 Gene

  1. The DNA sequence and biological annotation of human chromosome 1. (PMID: 16710414) Gregory S.G. … Bentley D.R. (Nature 2006) 3 4 67
  2. Novel genetic loci identified for the pathophysiology of childhood obesity in the Hispanic population. (PMID: 23251661) Comuzzie A.G. … Butte N.F. (PLoS ONE 2012) 3

Products for AADACL4 Gene

Sources for AADACL4 Gene

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