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Aliases for AACSP1 Gene

Aliases for AACSP1 Gene

  • Acetoacetyl-CoA Synthetase Pseudogene 1 2 3
  • Acetoacetyl-CoA Synthetase-Like 2
  • AACSL 3

External Ids for AACSP1 Gene

Previous Symbols for AACSP1 Gene

  • AACSL

Summaries for AACSP1 Gene

GeneCards Summary for AACSP1 Gene

AACSP1 (Acetoacetyl-CoA Synthetase Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for AACSP1 Gene

Genomics for AACSP1 Gene

Genomic Location for AACSP1 Gene

Start:
178,764,861 bp from pter
End:
178,818,435 bp from pter
Size:
53,575 bases
Orientation:
Minus strand

Genomic View for AACSP1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for AACSP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for AACSP1 Gene

No data available for Regulatory Elements for AACSP1 Gene

Proteins for AACSP1 Gene

Post-translational modifications for AACSP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for AACSP1 Gene

Domains for AACSP1 Gene

No data available for Gene Families , Protein Domains and UniProtKB/Swiss-Prot for AACSP1 Gene

Function for AACSP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for AACSP1 Gene

Localization for AACSP1 Gene

No data available for Gene Ontology (GO) - Cellular Components for AACSP1 Gene

Pathways for AACSP1 Gene

SuperPathways for AACSP1 Gene

No Data Available

Interacting Proteins for AACSP1 Gene

Gene Ontology (GO) - Biological Process for AACSP1 Gene

None

No data available for Pathways by source for AACSP1 Gene

Transcripts for AACSP1 Gene

mRNA/cDNA for AACSP1 Gene

(4) Additional mRNA sequences :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for AACSP1 Gene

Acetoacetyl-CoA synthetase pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for AACSP1 Gene

No ASD Table

Relevant External Links for AACSP1 Gene

GeneLoc Exon Structure for
AACSP1
ECgene alternative splicing isoforms for
AACSP1

Expression for AACSP1 Gene

mRNA expression in normal human tissues for AACSP1 Gene

mRNA differential expression in normal tissues according to GTEx for AACSP1 Gene

This gene is overexpressed in Testis (27.0), Skin - Sun Exposed (Lower leg) (6.8), and Skin - Not Sun Exposed (Suprapubic) (4.1).

SOURCE GeneReport for Unigene cluster for AACSP1 Gene Hs.382790

genes like me logo Genes that share expressions with AACSP1: view

Orthologs for AACSP1 Gene

Evolution for AACSP1 Gene

ENSEMBL:
Gene Tree for AACSP1 (if available)
TreeFam:
Gene Tree for AACSP1 (if available)

No data available for Orthologs for AACSP1 Gene

Paralogs for AACSP1 Gene

No data available for Paralogs for AACSP1 Gene

Variants for AACSP1 Gene

Sequence variations from dbSNP and Humsavar for AACSP1 Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type MAF
rs2068156 -- 178,766,296(+) TAAGA(A/G)TCAGA intron-variant
rs2068157 -- 178,766,349(+) CTTTT(C/T)AGAAA intron-variant
rs4073902 -- 178,770,138(-) GGGAA(C/T)TGGAC intron-variant
rs4073903 -- 178,769,999(-) CCACC(A/G)CCCCA intron-variant
rs4074670 -- 178,777,458(-) GAGAG(C/T)GGCAT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for AACSP1 Gene

Variant ID Type Subtype PubMed ID
nsv883217 CNV Gain 21882294
nsv509108 CNV Insertion 20534489

Relevant External Links for AACSP1 Gene

HapMap Linkage Disequilibrium report
AACSP1

Disorders for AACSP1 Gene

No disorders were found for AACSP1 Gene.

No data available for UniProtKB/Swiss-Prot for AACSP1 Gene

Publications for AACSP1 Gene

  1. cDNA-derived amino acid sequence of acetoacetyl-CoA synthetase from rat liver. (PMID: 10682835) Iwahori A. … Fukui T. (FEBS Lett. 2000) 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for AACSP1 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate AACSP1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for AACSP1
    • Block miRNA regulation of AACSP1 using miScript Target Protectors

    Sources for AACSP1 Gene

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