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3.8-1.5 Gene(Pseudogene)

HLA Complex Group 26 (Non-Protein Coding) Pseudogene

GCID:
GC06M030199
GIFtS:
5
Genes Participants
UDN Logo

Aliases for 3.8-1.5 Gene

Aliases for 3.8-1.5 Gene

  • HLA Complex Group 26 (Non-Protein Coding) Pseudogene 3

External Ids for 3.8-1.5 Gene

Previous GeneCards Identifiers for 3.8-1.5 Gene

  • GC06U900313
  • GC06M029840
  • GC06M029732
  • GC06M029804
  • GC06M029830
  • GC06M029857
  • GC06M030148

Summaries for 3.8-1.5 Gene

GeneCards Summary for 3.8-1.5 Gene

3.8-1.5 (HLA Complex Group 26 (Non-Protein Coding) Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for 3.8-1.5 Gene

Genomics for 3.8-1.5 Gene

Products:

  1. Regulatory Element

Regulatory Elements for 3.8-1.5 Gene

Enhancers for 3.8-1.5 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06G029762 1 Ensembl ENCODE 0.7 +2.5 2501 2.5 KLF1 ZSCAN26 ZBTB21 JUN MAX ZIC2 GATA3 POLR2A SCRT2 FOSL2 RPL23AP1 HLA-A HCG4P5 IFITM4P ZFP57 HLA-J MICD MICE HCG4P7 ZNRD1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around 3.8-1.5 on UCSC Golden Path with GeneCards custom track

Genomic Location for 3.8-1.5 Gene

Chromosome:
6
Start:
29,765,116 bp from pter
End:
29,766,296 bp from pter
Size:
1,181 bases
Orientation:
Minus strand

Genomic View for 3.8-1.5 Gene

Genes around 3.8-1.5 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
3.8-1.5 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for 3.8-1.5 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for 3.8-1.5 Gene

Proteins for 3.8-1.5 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for 3.8-1.5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for 3.8-1.5 Gene

Domains & Families for 3.8-1.5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for 3.8-1.5 Gene

Function for 3.8-1.5 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line
  7. Flow Cytometry

Animal Model Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for 3.8-1.5 Gene

Localization for 3.8-1.5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for 3.8-1.5 Gene

Pathways & Interactions for 3.8-1.5 Gene

SuperPathways for 3.8-1.5 Gene

PathCards logo More details on SuperPathways for 3.8-1.5
No Data Available

Interacting Proteins for 3.8-1.5 Gene

Gene Ontology (GO) - Biological Process for 3.8-1.5 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for 3.8-1.5 Gene

Drugs & Compounds for 3.8-1.5 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for 3.8-1.5 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone
  5. Flow Cytometry

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for 3.8-1.5 Gene

No ASD Table

Relevant External Links for 3.8-1.5 Gene

GeneLoc Exon Structure for
3.8-1.5

No data available for mRNA/cDNA for 3.8-1.5 Gene

Expression for 3.8-1.5 Gene

Products:

  1. Primer
No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for 3.8-1.5 Gene

Orthologs for 3.8-1.5 Gene

No data available for Orthologs and Evolution for 3.8-1.5 Gene

Paralogs for 3.8-1.5 Gene

No data available for Paralogs for 3.8-1.5 Gene

Variants for 3.8-1.5 Gene

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for 3.8-1.5 Gene

Disorders for 3.8-1.5 Gene

Relevant External Links for 3.8-1.5

Genetic Association Database (GAD)
3.8-1.5

No disorders were found for 3.8-1.5 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for 3.8-1.5 Gene

Publications for 3.8-1.5 Gene

  1. Genome-wide association study identifies variants in the MHC class I, IL10, and IL23R-IL12RB2 regions associated with BehAset's disease. (PMID: 20622878) Remmers E.F. … GA1l A. (Nat. Genet. 2010) 46 64
  2. Molecular dynamics of MHC genesis unraveled by sequence analysis of the 1,796,938-bp HLA class I region. (PMID: 10557312) Shiina T. … Inoko H. (Proc. Natl. Acad. Sci. U.S.A. 1999) 3 64

Products for 3.8-1.5 Gene

Sources for 3.8-1.5 Gene

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