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Aliases & Descriptions for PREP
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EC 3.4.21.26 3 | | MGC16060 2 | | OTTHUMP00000016916 2 | | OTTHUMP00000040498 2 | | PE 2, 3 | | PEP 2, 3 |
| | | Descriptions |
|---|
| Post-proline cleaving enzyme 2, 3 | | dJ355L5.1 (prolyl endopeptidase) 2 | | prolyl endopeptidase 2 | | prolyl oligopeptidase 2 |
|
| | Search outside databases for aliases for PREP genePrevious GC identifers: GC06M105561 GC06M105748 GC06M105771 |
Summaries for PREP(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for PREP: The protein encoded by this gene is a cytosolic prolyl endopeptidase that cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids long. Prolyl endopeptidases have been reported to be involved in the maturation and degradation of peptide hormones and neuropeptides. [provided by RefSeq] UniProtKB/Swiss-Prot: PPCE_HUMAN, P48147Function: Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids longGene Wiki entry for PREP |
Genomic Location for PREP
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the PREP gene 
Entrez Gene cytogenetic band: 6q22 Ensembl cytogenetic band: 6q21 HGNC cytogenetic band: 6q22PREP Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 6 GeneLoc Exon Structure GeneLoc location for GC06M105832:
(about GC identifiers)
Start:
|
105,832,199 bp from pter |
End:
|
105,957,662 bp from pter |
Size:
|
125,464 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000006.10 NT_025741.14
| Proteins for PREP
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: PPCE_HUMAN, P48147 (See
protein sequence)Recommended Name: Prolyl endopeptidase Size: 710 amino acids; 80700 Da
Subunit: Monomer
Subcellular location: Cytoplasm
PDB structures from and Proteopedia :3DDU (3D)
 
Secondary accessions: Q8N6D4Post-translational modifications:
The N-terminus is blocked1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_002717.3
ENSEMBL proteins: ENSP00000358106 ENSP00000358100
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: PREP 
1 Gene Ontology (GO) cellular component term (links to tree view): About this table
Antibodies for PREP: Assays for PREP: | Protein
Domains/ Families for PREP(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P48147
ProtoNet protein and cluster: P48147 2 Blocks protein families: IPB002470 Prolyl oligopeptidase serine protease (S9A) signature IPB002471 Prolyl endopeptidase
UniProtKB/Swiss-Prot: PPCE_HUMAN, P48147Similarity: Belongs to the peptidase S9A family | Gene Function for PREP
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002726
Applied Biosystems Silencer® siRNAs for PREP
Sigma-Aldrich siRNA and siRNA Panels for PREP  Sigma-Aldrich shRNA for PREP  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_002726                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002726                                  untagged cDNA clone in CMV expression vector: NM_002726 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_002726
UniProtKB/Swiss-Prot: PPCE_HUMAN, P48147Function: Cleaves peptide bonds on the C-terminal side of prolyl residues within peptides that are up to approximately 30 amino acids longCatalytic activity: Hydrolysis of Pro- -Xaa >> Ala- -Xaa in oligopeptidesEnzyme Number (IUBMB): EC 3.4.21.26 Genatlas biochemistry entry for PREP:prolyl oligopeptidase,alpha/beta hydrolase fold family2 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for PREP
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| 1 Sigma-Aldrich "Your Favorite Gene" Pathway for PREP (Your Favorite Gene powered by Ingenuity) 
5/20 Interacting proteins for PREP (ENSP000003581063) via UniProtKB, MINT, and/or STRING (see all 20
)About this table
1 Gene Ontology (GO) biological process term (links to tree view): About this table
|
Drugs & Compounds for PREP(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  |
Enzo Life Sciences drugs & compounds for PREP |
Compounds for PREP available from Tocris Bioscience
| Compound | Action |
CAS
number |
|---|
| Y-29794 oxalate | Prolyl endopeptidase inhibitor | [129184-48-1] | About this table
10/21 Novoseek chemical compound relationships for PREP gene (see all 21
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| poststatin |
92.39 |
12 |
8931723 (3), 8931724 (2), 8968396 (2), 8931725 (2) (see all 6) |
| z-pro-prolinal |
90.51 |
7 |
16942854 (2), 1980725 (1), 18927208 (1), 2162536 (1) (see all 5) |
| proline |
75.27 |
40 |
15509157 (2), 8652620 (1), 8951032 (1), 15217351 (1) (see all 28) |
| gluten |
66.85 |
10 |
16206502 (2), 16136593 (1), 16690904 (1), 18836204 (1) (see all 7) |
| gliadin |
57.64 |
7 |
15143130 (3), 14600421 (1), 16143118 (1), 16230098 (1) (see all 5) |
| deae-cellulose |
33.24 |
1 |
11137456 (1) |
| tripeptide |
26.87 |
2 |
8652620 (1), 2175370 (1) |
| lithium |
22.28 |
6 |
10329620 (1), 15005755 (1), 17324276 (1), 12015604 (1) |
| ethylacetate |
16.83 |
1 |
14723335 (1) |
| histidine |
15.69 |
2 |
2064618 (1), 7932578 (1) |
About this table
|
Transcripts for PREP(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_002726
Sigma-Aldrich siRNA and siRNA Panels for PREP  Sigma-Aldrich shRNA for PREP  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_002726 REFSEQ mRNAs for PREP gene: NM_002726.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_002726               OriGene GFP tagged cDNA clone in CMV expression vector: NM_002726                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_002726                                  untagged cDNA clone in CMV expression vector: NM_002726  Additional cDNA sequence: AB020018.1 AB028867.1 AK314195.1 AY660966.1 BC030636.2 D21102.1 X74496.1 7 DOTS entries: DT.100783673 DT.453965 DT.100000836 DT.121318525 DT.121318533 DT.97802437 DT.95179708 24/166 AceView cDNA sequences (see all 166
):BM791205 BM793693 BG744822 NM_002726 AA338078 BU931903 AI888722 BI859849 BM828521 CA430997 AA860678 AA594106 BM703107 H97083 BQ889182 BF724523 BU624788 BU617058 BX641834 AI289497 BM016994 CA308061 CD108093 CA444751
highest scoring ESTs for PREP:X74496 AU100064 AB020018 AB028867 AU127208 BE386750 BG744158 BG761528 BI550256 BM473133 Unigene Cluster for PREP: Prolyl endopeptidase Hs.436564 [show with all ESTs]Unigene Representative Sequence: NM_002726
GeneLoc Exon Structure
2 Ensembl transcripts including schematic representations: ENST00000369110
ENST00000369104
|
Expression for PREP
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| PREP expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for PREP
1 / 2 / 3 5 probe-sets matching PREP gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GAGAAGACTT
SOURCE GeneReport for Unigene cluster: Hs.436564
Expression variation in blood from EXPOLDB for PREP |
Orthologs for PREP
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for PREP gene from 5/17 species (see all 17
)
About this table Species with no ortholog for PREP
ENSEMBL Gene Tree for PREP | Paralogs for PREP(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for PREP gene
- PREPL2
|
SNPs/Variants for PREP(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for PREP (up to first 250kb)
|
Disorders & Mutations for PREP
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 600400
10/14 Novoseek disease relationships for PREP gene (see all 14
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| celiac disease |
66.33 |
10 |
16206502 (2), 16143118 (2), 18836204 (2), 16136593 (1) (see all 7) |
| memory disorders |
52.21 |
3 |
12202494 (1), 12228249 (1), 10747969 (1) |
| amnesia |
44.94 |
2 |
15713471 (1), 11915948 (1) |
| trypanosomiasis |
42.77 |
1 |
11915948 (1) |
| alzheimers disease |
34.87 |
5 |
16187206 (1), 11711876 (1), 17703733 (1), 16390203 (1) (see all 5) |
| neurodegenerative diseases |
15.71 |
2 |
16092940 (1), 16086671 (1) |
| major depression |
11.84 |
5 |
8038298 (2), 8570777 (1), 9802123 (1) |
| schizophrenia |
11.71 |
2 |
10363664 (1), 9802123 (1) |
| fibromyalgia |
6.61 |
3 |
9723150 (2), 11543693 (1) |
| psychiatric disorder |
3.70 |
7 |
10363664 (1), 15296652 (1), 9802123 (1), 18547158 (1) |
About this table
Human Genome Epidemiology Navigator: PREP (1 document)
|
Medical News for PREP(Possibly Related Articles in
Doctor's Guide)
About This Section
| |
Publications for PREP (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/196 PubMed articles for PREP gene (see all 196
):- Cloning and sequence analysis of the gene encoding human lymphocyte prolyl endopeptidase. (PubMed id 7959018)1, 2, 3, 4 Vanhoof G.... Scharpe S. (1994)
- The purification, characterization and analysis of primary and secondary-structure of prolyl oligopeptidase from human lymphocytes. Evidence that the enzyme belongs to the alpha/beta hydrolase fold family. (PubMed id 7588785)1, 3, 4 Goossens F....Scharpe S. (1995)
- Molecular cloning and characterization of prolyl endopeptidase from human T cells. (PubMed id 8089089)1, 3, 4 Shirasawa Y.... Hirashima A. (1994)
- Subcellular localization suggests novel functions for prolyl endopeptidase in protein secretion. (PubMed id 16092940)1, 3 Schulz I....Rossner S. (2005)
- Distribution of prolyl endopeptidase activities in rat and human brain. (PubMed id 11792464)1, 3 Irazusta J....Casis L. (2002)
- Pyroglutamyl peptidase I and prolyl endopeptidase in human semen: increased activity in necrozoospermia. (PubMed id 15380924)1, 3 Valdivia A....Casis L. (2004)
- Characterization of a prolyl endopeptidase (kininase) from human urine using fluorogenic quenched substrates. (PubMed id 11137456)1, 3 Quinto B.M....Casarini D.E. (2000)
- Prolyl oligopeptidase: an unusual beta-propeller domain regulates proteolysis. (PubMed id 9695945)1, 3 Fulop V....Polgar L. (1998)
- Subregional mapping of the human lymphocyte prolyl oligopeptidase gene (PREP) to human chromosome 6q22. (PubMed id 8893811)1, 3 Goossens F.J....Scharpe S.L. (1996)
- Distribution of immunoreactive prolyl oligopeptidase in human and rat brain. (PubMed id 17401647)1, 3 Myohanen T.T....Mannisto P.T. (2007)
|
Search for PREP
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing PREP
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing PREP
(According to HUGE)
About This Section
| -- |
Specialized Databases showing PREP(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for PREP(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for PREP:

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|
 |  |  |
| | | | Tocris compounds for PREP |
|
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
|