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Aliases &
Descriptions
for C21orf49
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase, and/or 9Nature:405,311-319 and CroW21)
About This Section
|
| | | Descriptions |
|---|
| chromosome 21 open reading frame 49 2 | | spliced EST T19019 9 |
|
| |
Search outside databases for aliases for C21orf49 genePrevious GC identifer: GC21U990060 |
Summaries
for C21orf49(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| -- |
Genomic Location
for C21orf49
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences, Whole Chromsome Sequence According to
Nature (Cited Here with Permission):405,311-319 and CroW21)
About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 21q22.11 Ensembl cytogenetic band: 21q22.11 HGNC cytogenetic band: 21q22.11
Nature(405: 311-319) cytogenetic band: 21q22.11 | C21orf49 Gene in genomic location: bands according to Ensembl, locations according to
 (and/or Entrez Gene and/or Ensembl if different)
 |
| GC21P033066: |
GeneLoc |
Nature:405,311-319 |
Start:
|
33,066,344 bp from pter |
19,721,142 bp from centromere |
End:
|
33,091,825 bp from pter |
19,737,649 bp from centromere |
Size:
|
25,482 bases |
16,508 bases |
Orientation:
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plus strand |
plus strand |
RefSeq DNA sequence:- NC_000021.7 NT_011512.10
Proteins
for C21orf49
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: CU049_HUMAN, Q17RA5 (See
protein sequence)Recommended Name: Putative uncharacterized protein C21orf49 Size: 79 amino acids; 8913 Da
ENSEMBL proteins: ENSP00000371814 ENSP00000371815 ENSP00000371812
Human Recombinant Proteins  Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
Antibodies for C21orf49:
Assays for C21orf49: | Protein
Domains/
Families
for C21orf49(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| ProtoNet protein and cluster: Q17RA5 | Gene Function
for C21orf49
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3): NM_001006116
 Applied Biosystems Silencer® siRNAs for C21orf49
 Sigma-Aldrich siRNA for C21orf49
Sigma-Aldrich shRNA for C21orf49
Explore Sigma-Aldrich super-pooled esiRNAs
OriGene untagged cDNA clone in CMV expression vector: NM_001006116
Primers:  Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers
OriGene genome-wide validated SYBR primer pairs: NM_001006116
| Pathways & Interactions
for C21orf49
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
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Drugs & Compounds
for C21orf49(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
 Browse Tocris compounds for C21orf49
|
Transcripts
for C21orf49(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank,
RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene)
About This Section
| OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3): NM_001006116
Sigma-Aldrich siRNA for C21orf49
Sigma-Aldrich shRNA for C21orf49
Explore Sigma-Aldrich super-pooled esiRNAs
OriGene untagged cDNA clone in CMV expression vector: NM_001006116
Additional cDNA sequence: AK096601.1 BC034794.1 BC117397.1 BC117399.1 3 DOTS entries: DT.442944 DT.205334 DT.95302313
 highest scoring ESTs for C21orf49:AA779903 AK096601 AV655412 BX477211 T95301 AA361369 AI214627 AV717800 AW263082 BC034794 Unigene Cluster for C21orf49: Chromosome 21 open reading frame 49 Hs.54725 [show with all ESTs]Unigene Representative Sequence: AK096601
GeneLoc Exon Structure
3 Ensembl transcripts including schematic representations: ENST00000382377
ENST00000382378
ENST00000382375
|
Expression
for C21orf49
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| C21orf49 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for C21orf49
1 / 2 / 3 5 probe-sets matching C21orf49 gene Data from
(Publications) and GNF BioGPS
About these images
About these images
CGAP SAGE TAG: --
SOURCE GeneReport for Unigene cluster: Hs.54725
|
Orthologs
for C21orf49
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
| ENSEMBL Gene Tree for C21orf49 | Paralogs
for C21orf49(Paralogs according to 1HomoloGene
and 2Ensembl, Pseudogenes according to 3Pseudogene.org)
About This Section
| -- |
SNPs/Variants
for C21orf49(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
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| -- |
Disorders & Mutations
for C21orf49
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
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| -- |
Medical News
for C21orf49(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications
for C21orf49 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 6 PubMed articles for C21orf49 gene: |
Search for C21orf49
(in PubMed,
OMIM, and NCBI Bookshelf)
About This Section
|
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Genome Databases showing C21orf49
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing C21orf49
(According to HUGE)
About This Section
| -- |
Specialized Databases showing C21orf49(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
About This Section
|
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| Services
for C21orf49(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals,
Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich,
Enzo Life Sciences, and/or Tocris Bioscience)
About This Section
| 
Products for C21orf49:
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GeneCards Homepage - Last full update: 1 Jul 2009
Incremental update: 13 Oct 2009
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