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Aliases & Descriptions for CHRM3
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| | | Descriptions |
|---|
| cholinergic receptor, muscarinic 3 2 | | m3 muscarinic receptor 2 | | muscarinic acetylcholine receptor M3 2 |
|
| | Search outside databases for aliases for CHRM3 genePrevious GC identifers: GC01P238144 GC01P235523 GC01P235846 GC01P237111 GC01P236396 |
Summaries for CHRM3(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for CHRM3: The muscarinic cholinergic receptors belong to a larger family of G protein-coupled receptors. The functional diversity of these receptors is defined by the binding of acetylcholine and includes cellular responses such as adenylate cyclase inhibition, phosphoinositide degeneration, and potassium channel mediation. Muscarinic receptors influence many effects of acetylcholine in the central and peripheral nervous system. The muscarinic cholinergic receptor 3 controls smooth muscle contraction and its stimulation causes secretion of glandular tissue. [provided by RefSeq] UniProtKB/Swiss-Prot: ACM3_HUMAN, P20309Function: The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins. Primary transducing effect is Pi turnoverGene Wiki entry for CHRM3 (Muscarinic_acetylcholine_receptor_M3) |
Genomic Location for CHRM3
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the CHRM3 gene 
Entrez Gene cytogenetic band: 1q43 Ensembl cytogenetic band: 1q43 HGNC cytogenetic band: 1q41-q44CHRM3 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 1 GeneLoc Exon Structure GeneLoc location for GC01P237858:
(about GC identifiers)
Start:
|
237,858,996 bp from pter |
End:
|
238,139,343 bp from pter |
Size:
|
280,348 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000001.9 NT_004836.17
| Proteins for CHRM3
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: ACM3_HUMAN, P20309 (See
protein sequence)Recommended Name: Muscarinic acetylcholine receptor M3 Size: 590 amino acids; 66128 Da
Subcellular location: Cell membrane; Multi-pass membrane protein. Cell junction, synapse, postsynaptic cell membrane; Multi-pass membrane protein. Basolateral cell membrane; Multi-pass membrane protein
PDB structures from and Proteopedia :2CSA (3D)
 
Secondary accessions: Q0VAJ8 Q4QRI3 Q5VXY2 Q9HB60REFSEQ proteins: NP_000731.1
ENSEMBL proteins: ENSP00000255380
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
5/6 Gene Ontology (GO) cellular component terms (links to tree view) (see all 6
): About this table
Antibodies for CHRM3: Assays for CHRM3: | Protein
Domains/ Families for CHRM3(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P20309
ProtoNet protein and cluster: P20309 2 Blocks protein families: IPB000995 Muscarinic acetylcholine receptor signature IPB001183 Muscarinic M3 receptor signature
UniProtKB/Swiss-Prot: ACM3_HUMAN, P20309Similarity: Belongs to the G-protein coupled receptor 1 family | Gene Function for CHRM3
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000740
Applied Biosystems Silencer® siRNAs for CHRM3
Sigma-Aldrich siRNA and siRNA Panels for CHRM3  Sigma-Aldrich shRNA Panels and shRNA for CHRM3  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_000740                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000740                                  untagged cDNA clone in CMV expression vector: NM_000740 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_000740
UniProtKB/Swiss-Prot: ACM3_HUMAN, P20309Function: The muscarinic acetylcholine receptor mediates various cellular responses, including inhibition of adenylate cyclase, breakdown of phosphoinositides and modulation of potassium channels through the action of G proteins. Primary transducing effect is Pi turnoverGenatlas biochemistry entry for CHRM3:cholinergic receptor,muscarinic 3,G protein coupled receptor superfamily11 MGI mutant phenotypes (inferred from 3 alleles ) (MGI details for Chrm3):
4 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for CHRM3
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| 2 Sigma-Aldrich "Your Favorite Gene" Pathways for CHRM3 (Your Favorite Gene powered by Ingenuity) 
1 Interacting protein for CHRM3 (P203092) via UniProtKB, MINT, and/or STRINGAbout this table
5/7 Gene Ontology (GO) biological process terms (links to tree view) (see all 7
): About this table
|
Drugs & Compounds for CHRM3(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  |
Enzo Life Sciences drugs & compounds for CHRM3 |
Compounds for CHRM3 available from Tocris Bioscience About this table
10/19 Novoseek chemical compound relationships for CHRM3 gene (see all 19
)
| Compound |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| zamifenacin |
84.77 |
2 |
10188786 (1), 10580922 (1) |
| 5,11-dihydro-6h-pyrido(2,3-b)(1,4)benzodiazepin-6-one |
82.27 |
1 |
9214706 (1) |
| phosphoinositide |
71.16 |
10 |
1343598 (1), 8832588 (1), 2154728 (1), 15383626 (1) (see all 10) |
| inositol 1,4,5 trisphosphate |
55.55 |
8 |
8383801 (1), 1731321 (1), 7575458 (1), 8401943 (1) (see all 6) |
| calcium |
51.51 |
54 |
1731321 (3), 1319463 (3), 15068397 (2), 8383801 (2) (see all 37) |
| phosphatidylinositol |
39.16 |
2 |
8752132 (1) |
| gtp |
38.75 |
2 |
9309207 (1), 14630933 (1) |
| cyclic amp |
36.68 |
2 |
11877431 (1), 1657623 (1) |
| tyrosine |
21.43 |
11 |
9636140 (3), 7713942 (2), 7957182 (1), 10816433 (1) (see all 7) |
| phorbol 12,13-dibutyrate |
15.77 |
1 |
8977143 (1) |
About this table
|
Transcripts for CHRM3(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000740
Sigma-Aldrich siRNA and siRNA Panels for CHRM3  Sigma-Aldrich shRNA Panels and shRNA for CHRM3  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_000740 REFSEQ mRNAs for CHRM3 gene: NM_000740.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000740               OriGene GFP tagged cDNA clone in CMV expression vector: NM_000740                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000740                                  untagged cDNA clone in CMV expression vector: NM_000740  Additional cDNA sequence: AF279779.1 AF385589.1 AF498917.1 AK056349.1 AK074575.1 BC096844.1 BC121026.2 BC121027.2 7 DOTS entries: DT.309020 DT.70102224 DT.121429975 DT.100019144 DT.100672701 DT.95339810 DT.99982637 24/32 AceView cDNA sequences (see all 32
):CA390548 AW611918 NM_000740 AF498917 BM128615 AK074575 CA395561 BM462969 BM128379 T28795 BF311874 BF966880 AF279779 CA394725 AF385589 T23501 BP360731 BI196876 CB565880 CD654050 AK056349 CB528690 BP370844 AA349743
highest scoring ESTs for CHRM3:AA349743 AF279779 AF385589 AF498917 AK074575 AW950854 BE933387 BF311874 BG190770 BG978953 Unigene Cluster for CHRM3: Cholinergic receptor, muscarinic 3 Hs.7138 [show with all ESTs]Unigene Representative Sequence: NM_000740
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000255380
|
Expression for CHRM3
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| CHRM3 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for CHRM3
1 / 2 / 3 5 probe-sets matching CHRM3 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GTTCTGGTGA
SOURCE GeneReport for Unigene cluster: Hs.7138
Expression variation in blood from EXPOLDB for CHRM3 |
Orthologs for CHRM3
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for CHRM3 gene from 5/8 species (see all 8
)
About this table Species with no ortholog for CHRM3
ENSEMBL Gene Tree for CHRM3 | Paralogs for CHRM3(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for CHRM3 gene
- CHRM52 CHRM22 CHRM12
|
SNPs/Variants for CHRM3(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for CHRM3 (up to first 250kb)
|
Disorders & Mutations for CHRM3
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 118494
10/14 Novoseek disease relationships for CHRM3 gene (see all 14
)
| Disease |
Score |
Articles |
PubMed IDs for Articles with Shared Sentences (# sentences) |
| overactive bladder |
68.60 |
8 |
15839920 (2), 16100298 (2), 15493952 (1), 16096831 (1) (see all 6) |
| xerostomia |
60.54 |
3 |
17899308 (1), 12974516 (1), 17914991 (1) |
| sjogrens syndrome |
58.09 |
4 |
15866705 (1), 16014696 (1), 11850533 (1), 15030576 (1) |
| sjogrens syndrome primary |
56.28 |
5 |
9099930 (1), 9430556 (1), 15353609 (1), 11850533 (1) (see all 5) |
| astrocytoma |
47.34 |
2 |
7935319 (1), 16280122 (1) |
| pulmonary disease chronic obstructive |
33.34 |
1 |
10069502 (1) |
| leukemia basophilic |
26.97 |
2 |
7557261 (1), 15467192 (1) |
| lung diseases obstructive |
15.79 |
1 |
16870658 (1) |
| colon cancer |
13.70 |
9 |
12379313 (2), 14583469 (2), 18653726 (1), 19221016 (1) (see all 5) |
| asthma |
12.82 |
2 |
12642833 (2) |
About this table
Human Gene Mutation Database: CHRM3 Genetic Association Database: CHRM3 Human Genome Epidemiology Navigator: CHRM3 (11 documents)
|
Medical News for CHRM3(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for CHRM3 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/251 PubMed articles for CHRM3 gene (see all 251
):- Sequence variation in the promoter region of the cholinergic receptor muscarinic 3 gene and asthma and atopy. (PubMed id 12642833)1, 3, 6 Donfack J....Ober C. (2003)
- The DNA sequence and biological annotation of human chromosome 1. (PubMed id 16710414)3, 4 Gregory S.G.... Bentley D.R. (2006)
- Identification and structural determination of the M(3) muscarinic acetylcholine receptor basolateral sorting signal. (PubMed id 15870063)3, 4 Iverson H.A.... Nathanson N.M. (2005)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Mutation screening of the muscarinic m2 and m3 receptor genes in asthmatics, outgrow subjects, and normal controls. (PubMed id 12381439)3, 6 Yamamoto T....Ohta K. (2002)
- Antisense promoter of human L1 retrotransposon drives transcription of adjacent cellular genes. (PubMed id 11238933)3, 4 Speek M. (2001)
- Cloning and expression of the human and rat m5 muscarinic acetylcholine receptor genes. (PubMed id 3272174)3, 4 Bonner T.I.... Buckley N.J. (1988)
- Distinct primary structures, ligand-binding properties and tissue- specific expression of four human muscarinic acetylcholine receptors. (PubMed id 3443095)3, 4 Peralta E.G....Capon D.J. (1987)
- Mapping of single amino acid residues required for selective activation of Gq/11 by the m3 muscarinic acetylcholine receptor. (PubMed id 7629074)1, 3 Blin N....Wess J. (1995)
- Extracellular tau promotes intracellular calcium increase through M1 and M3 muscarinic receptors in neuronal cells. (PubMed id 18272392)1, 3 Gomez-Ramos A....Avila J. (2008)
|
Search for CHRM3
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing CHRM3
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing CHRM3
(According to HUGE)
About This Section
| -- |
Specialized Databases showing CHRM3(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for CHRM3(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for CHRM3:

 | |
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|
 |  |  |
| | | | Tocris compounds for CHRM3 |
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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