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Aliases & Descriptions for ADRA1D
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| ADRA1 1, 2 | | ADRA1A 1, 2, 3, 5 | | ADRA1R 1, 2 | | ALPHA1 2 | | DAR 2 | | OTTHUMP00000030160 2 | | dJ779E11.2 2 |
| | | Descriptions |
|---|
| Alpha 1D-adrenoceptor 3 | | Alpha 1D-adrenoreceptor 3 | | Alpha-1A adrenergic receptor 3 | | Alpha-adrenergic receptor 1a 3 | | adrenergic, alpha -1D-, receptor 2 | | adrenergic, alpha-1A-, receptor 2 | | adrenergic, alpha-1D-, receptor 2 | | alpha-1D-adrenergic receptor 2 |
|
| | Search outside databases for aliases for ADRA1D genePrevious GC identifers: GC20M004189 GC20M004196 |
Summaries for ADRA1D(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for ADRA1D: Alpha-1-adrenergic receptors (alpha-1-ARs) are members of the G protein-coupled receptor superfamily. They activate mitogenic responses and regulate growth and proliferation of many cells. There are 3 alpha-1-AR subtypes: alpha-1A, -1B and -1D, all of which signal through the Gq/11 family of G-proteins and different subtypes show different patterns of activation. This gene encodes alpha-1D-adrenergic receptor. Similar to alpha-1B-adrenergic receptor gene, this gene comprises 2 exons and a single intron that interrupts the coding region. [provided by RefSeq] UniProtKB/Swiss-Prot: ADA1D_HUMAN, P25100Function: This alpha-adrenergic receptor mediates its effect through the influx of extracellular calciumGene Wiki entry for ADRA1D (Alpha-1D_adrenergic_receptor) |
Genomic Location for ADRA1D
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the ADRA1D gene 
Entrez Gene cytogenetic band: 20p13 Ensembl cytogenetic band: 20p13 HGNC cytogenetic band: 20p13ADRA1D Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 20 GeneLoc Exon Structure GeneLoc location for GC20M004149:
(about GC identifiers)
Start:
|
4,149,278 bp from pter |
End:
|
4,177,659 bp from pter |
Size:
|
28,382 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000020.9 NT_011387.8
| Proteins for ADRA1D
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: ADA1D_HUMAN, P25100 (See
protein sequence)Recommended Name: Alpha-1D adrenergic receptor Size: 572 amino acids; 60463 Da
Subcellular location: Cell membrane; Multi-pass membrane protein
Secondary accessions: Q9NPY0REFSEQ proteins: NP_000669.1
ENSEMBL proteins: ENSP00000368766
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
2 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for ADRA1D: Assays for ADRA1D: | Protein
Domains/ Families for ADRA1D(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P25100
ProtoNet protein and cluster: P25100 2 Blocks protein families: IPB000363 Alpha-1A adrenergic receptor signature IPB002233 Adrenergic receptor signature
UniProtKB/Swiss-Prot: ADA1D_HUMAN, P25100Similarity: Belongs to the G-protein coupled receptor 1 family | Gene Function for ADRA1D
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000678
Applied Biosystems Silencer® siRNAs for ADRA1D
Sigma-Aldrich siRNA and siRNA Panels for ADRA1D  Sigma-Aldrich shRNA Panels and shRNA for ADRA1D  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_000678                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000678                                  untagged cDNA clone in CMV expression vector: NM_000678 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_000678
UniProtKB/Swiss-Prot: ADA1D_HUMAN, P25100Function: This alpha-adrenergic receptor mediates its effect through the influx of extracellular calciumGenatlas biochemistry entry for ADRA1D:adrenergic,alpha-1D-,receptor,G protein coupled receptor superfamily,stimulating,acting through the phosphadidylinositol/Ca2+ second messenger system5 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Adra1d):
4 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for ADRA1D
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
2 Sigma-Aldrich "Your Favorite Gene" Pathways for ADRA1D (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for ADRA1D 
5/11 Interacting proteins for ADRA1D (ENSP000003687663) via UniProtKB, MINT, and/or STRING (see all 11
)About this table
5/9 Gene Ontology (GO) biological process terms (links to tree view) (see all 9
): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0001986 | negative regulation of the force of heart contraction during baroreceptor response to increased systemic arterial blood pressure |
IEA | -- | | GO:0001994 | norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure |
IEA | -- | | GO:0006259 | DNA metabolic process |
TAS | 10969806 | | GO:0007165 | signal transduction |
IEA | -- | | GO:0007186 | G-protein coupled receptor protein signaling pathway |
TAS | 1656955 | About this table
|
Drugs & Compounds for ADRA1D(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  |
Enzo Life Sciences drugs & compounds for ADRA1D |
Compounds for ADRA1D available from Tocris Bioscience About this table
2 PharmGKB drug compound relationships for ADRA1D geneAbout this table
|
Transcripts for ADRA1D(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000678
Sigma-Aldrich siRNA and siRNA Panels for ADRA1D  Sigma-Aldrich shRNA Panels and shRNA for ADRA1D  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_000678 REFSEQ mRNAs for ADRA1D gene: NM_000678.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000678               OriGene GFP tagged cDNA clone in CMV expression vector: NM_000678                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000678                                  untagged cDNA clone in CMV expression vector: NM_000678  Additional cDNA sequence: L31772.1 S70782.1 U03864.1 4 DOTS entries: DT.442233 DT.92416103 DT.95254294 DT.95357194 21 AceView cDNA sequences:BX280890 AI457674 CA424283 BE439970 U03864 BI828457 NM_000678 CA310090 L31772 AI611270 S70782 AW875208 AW975996 AA809802 M76446 AW875213 BM546478 AA921964 AA909273 BQ067091 AW577200
highest scoring ESTs for ADRA1D:AA909273 AI457674 L31772 M76446 S70782 U03864 AA921964 AW577200 NM_000678 AA809802 Unigene Cluster for ADRA1D: Adrenergic, alpha-1D-, receptor Hs.557 [show with all ESTs]Unigene Representative Sequence: NM_000678
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000379453
|
Expression for ADRA1D
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| ADRA1D expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for ADRA1D
1 / 2 / 3 7 probe-sets matching ADRA1D gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: GGCCCGCTGT
SOURCE GeneReport for Unigene cluster: Hs.557
Expression variation in blood from EXPOLDB for ADRA1D |
Orthologs for ADRA1D
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for ADRA1D gene from 5/7 species (see all 7
)
| Organism |
Gene |
Locus |
Description |
Human Similarity |
NCBI accessions |
chimpanzee (Pan troglodytes) |
ADRA1D1 |
-- |
adrenergic, alpha-1D-, receptor |
99.76(n) 99.27(a) |
469869 XM_525254.2 XP_525254.2 |
cow (Bos taurus) |
ADRA1D1 |
-- |
adrenergic, alpha-1D-, receptor |
83.39(n) 82.74(a) |
539543 XM_587980.3 XP_587980.3 |
rat (Rattus norvegicus) |
Adra1d1 |
-- |
adrenergic, alpha-1D-, receptor |
83.36(n) 86.99(a) |
29413 NM_024483.1 NP_077809.1 |
mouse (Mus musculus) |
Adra1d1, 5 |
2 (74.90 cM)5
|
adrenergic receptor, alpha 1d1, 5 |
83.51(n)1 86.83(a)1 |
115501 NM_013460.41 NP_038488.41 AB0306425 AL8317315 (see all 8) |
chicken (Gallus gallus) |
ADRA1D1 |
-- |
adrenergic, alpha-1D-, receptor |
68.35(n) 64.65(a) |
422933 XM_420871.2 XP_420871.2 |
About this table Species with no ortholog for ADRA1D
ENSEMBL Gene Tree for ADRA1D | Paralogs for ADRA1D(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for ADRA1D gene
- ADRA1A2 ADRA1B2 HRH22
|
SNPs/Variants for ADRA1D(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for ADRA1D (up to first 250kb)
|
Disorders & Mutations for ADRA1D
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 104219
3 Novoseek disease relationships for ADRA1D gene
About this table
1 PharmGKB disease relationship for ADRA1D geneAbout this table
Genetic Association Database: ADRA1D Human Genome Epidemiology Navigator: ADRA1D (3 documents)
|
Medical News for ADRA1D(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for ADRA1D (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/61 PubMed articles for ADRA1D gene (see all 61
):- Molecular analysis of adrenergic receptor genes and interleukin-4/interleukin-4 receptor genes in patients with interstitial cystitis. (PubMed id 12442007)1, 3, 6 Sugaya K....Ogawa Y. (2002)
- Cloning of the human alpha 1d-adrenergic receptor and inducible expression of three human subtypes in SK-N-MC cells. (PubMed id 7746284)1, 3, 4 Esbenshade T.A.... Murphy T.J. (1995)
- The DNA sequence and comparative analysis of human chromosome 20. (PubMed id 11780052)3, 4 Deloukas P....Rogers J. (2001)
- Cloning and pharmacological characterization of human alpha-1 adrenergic receptors: sequence corrections and direct comparison with other species homologues. (PubMed id 7815325)3, 4 Schwinn D.A.... Bailey D.S. (1995)
- The alpha 1-adrenergic receptor that mediates smooth muscle contraction in human prostate has the pharmacological properties of the cloned human alpha 1c subtype. (PubMed id 8183249)3, 4 Forray C.... Gluchowski C. (1994)
- Cloning, expression and characterization of human alpha adrenergic receptors alpha 1a, alpha 1b and alpha 1c. (PubMed id 8024574)3, 4 Weinberg D.H.... Bayne M. (1994)
- Genes encoding adrenergic receptors are not clustered on the long arm of human chromosome 5. (PubMed id 8039425)2, 3 Loftus S.K....Wasmuth J.J. (1994)
- Molecular cloning and sequencing of a cDNA encoding a human alpha 1A adrenergic receptor. (PubMed id 1656955)3, 4 Bruno J.F.... Berelowitz M. (1991)
- Syntrophins regulate alpha1D-adrenergic receptors through a PDZ domain-mediated interaction. (PubMed id 16533813)1, 3 Chen Z....Minneman K.P. (2006)
- Amino acids of the human alpha1d-adrenergic receptor involved in antagonist binding. (PubMed id 18187928)1, 3 Nagaoka Y....Nagatomo T. (2008)
|
Search for ADRA1D
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing ADRA1D
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing ADRA1D
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ADRA1D(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for ADRA1D(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for ADRA1D:

|
GeneCards Homepage - Last full update: 1 Jul 2009
Incremental update: 13 Oct 2009
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