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Aliases & Descriptions for ADRA1B
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| ADRA1 2 | | ALPHA1BAR 2 |
| | | Descriptions |
|---|
| Alpha 1B-adrenoceptor 3 | | Alpha 1B-adrenoreceptor 3 | | adrenergic, alpha-1B-, receptor 2 | | alpha-1B-adrenergic receptor 2 |
|
| | Search outside databases for aliases for ADRA1B genePrevious GC identifers: GC05P159198 GC05P159853 GC05P159324 |
Summaries for ADRA1B(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for ADRA1B: Alpha-1-adrenergic receptors (alpha-1-ARs) are members of the G protein-coupled receptor superfamily. They activate mitogenic responses and regulate growth and proliferation of many cells. There are 3 alpha-1-AR subtypes: alpha-1A, -1B and -1D, all of which signal through the Gq/11 family of G-proteins and different subtypes show different patterns of activation. This gene encodes alpha-1B-adrenergic receptor, which induces neoplastic transformation when transfected into NIH 3T3 fibroblasts and other cell lines. Thus, this normal cellular gene is identified as a protooncogene. This gene comprises 2 exons and a single large intron of at least 20 kb that interrupts the coding region. [provided by RefSeq] UniProtKB/Swiss-Prot: ADA1B_HUMAN, P35368Function: This alpha-adrenergic receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger systemGene Wiki entry for ADRA1B (Alpha-1B_adrenergic_receptor) |
Genomic Location for ADRA1B
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the ADRA1B gene 
Entrez Gene cytogenetic band: 5q23-q32 Ensembl cytogenetic band: 5q33.3 HGNC cytogenetic band: 5q23-q32ADRA1B Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 5 GeneLoc Exon Structure GeneLoc location for GC05P159276:
(about GC identifiers)
Start:
|
159,276,318 bp from pter |
End:
|
159,332,595 bp from pter |
Size:
|
56,278 bases |
Orientation:
|
plus strand |
RefSeq DNA sequence:- NC_000005.8 NT_023133.12
| Proteins for ADRA1B
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: ADA1B_HUMAN, P35368 (See
protein sequence)Recommended Name: Alpha-1B adrenergic receptor Size: 520 amino acids; 56836 Da
Subcellular location: Cell membrane; Multi-pass membrane proteinPost-translational modifications:
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_000670.1
ENSEMBL proteins: ENSP00000306662
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
3 Gene Ontology (GO) cellular component terms (links to tree view): About this table
Antibodies for ADRA1B: Assays for ADRA1B: | Protein
Domains/ Families for ADRA1B(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P35368
ProtoNet protein and cluster: P35368 2 Blocks protein families: IPB001115 Alpha-1B adrenergic receptor signature IPB002233 Adrenergic receptor signature
UniProtKB/Swiss-Prot: ADA1B_HUMAN, P35368Similarity: Belongs to the G-protein coupled receptor 1 family | Gene Function for ADRA1B
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000679
Applied Biosystems Silencer® siRNAs for ADRA1B
Sigma-Aldrich siRNA and siRNA Panels for ADRA1B  Sigma-Aldrich shRNA Panels and shRNA for ADRA1B  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_000679                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000679                                  untagged cDNA clone in CMV expression vector: NM_000679 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_000679
UniProtKB/Swiss-Prot: ADA1B_HUMAN, P35368Function: This alpha-adrenergic receptor mediates its action by association with G proteins that activate a phosphatidylinositol-calcium second messenger systemGenatlas biochemistry entry for ADRA1B:adrenergic,alpha-1B-,receptor,G protein coupled receptor superfamily,stimulating,acting through the phosphatidylinositol/Ca2+ second messenger system,involved in the control of vascular tone11 MGI mutant phenotypes (inferred from 1 allele ) (MGI details for Adra1b):
4 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for ADRA1B
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
2 Sigma-Aldrich "Your Favorite Gene" Pathways for ADRA1B (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for ADRA1B 
5/35 Interacting proteins for ADRA1B (P353682 ENSP000003066623) via UniProtKB, MINT, and/or STRING (see all 35
)About this table
5/22 Gene Ontology (GO) biological process terms (links to tree view) (see all 22
): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0001974 | blood vessel remodeling |
IEA | -- | | GO:0001975 | response to amphetamine |
IEA | -- | | GO:0001987 | vasoconstriction of artery involved in baroreceptor response to lowering of systemic arterial blood pressure |
IEA | -- | | GO:0001996 | positive regulation of heart rate by epinephrine-norepinephrine |
IEA | -- | | GO:0001997 | positive regulation of the force of heart contraction by epinephrine-norepinephrine |
IEA | -- | About this table
|
Drugs & Compounds for ADRA1B(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|  |
Enzo Life Sciences drugs & compounds for ADRA1B |
Compounds for ADRA1B available from Tocris Bioscience About this table
7 Novoseek chemical compound relationships for ADRA1B gene
About this table
|
Transcripts for ADRA1B(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_000679
Sigma-Aldrich siRNA and siRNA Panels for ADRA1B  Sigma-Aldrich shRNA Panels and shRNA for ADRA1B  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_000679 REFSEQ mRNAs for ADRA1B gene: NM_000679.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_000679               OriGene GFP tagged cDNA clone in CMV expression vector: NM_000679                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_000679                                  untagged cDNA clone in CMV expression vector: NM_000679  Additional cDNA sequence: AK309989.1 BC136568.1 BC136569.1 L31773.1 U03865.1 1 DOTS entry: DT.304573 11 AceView cDNA sequences:CB044689 AI566163 U03865 AW138726 BQ576306 CB044690 L31773 NM_000679 AW732369 AW733134 AW236065
highest scoring ESTs for ADRA1B:U03865 AI566163 AW138726 AW236065 AW732369 AW733134 BQ576306 CB044689 L31773 CB044690 Unigene Cluster for ADRA1B: Adrenergic, alpha-1B-, receptor Hs.368632 [show with all ESTs]Unigene Representative Sequence: NM_000679
GeneLoc Exon Structure
1 Ensembl transcript including schematic representation: ENST00000306675
|
Expression for ADRA1B
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| ADRA1B expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for ADRA1B
1 / 2 / 3 3 probe-sets matching ADRA1B gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: CTGAGAGCCT
SOURCE GeneReport for Unigene cluster: Hs.368632
Expression variation in blood from EXPOLDB for ADRA1B |
Orthologs for ADRA1B
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for ADRA1B gene from 5/8 species (see all 8
)
| Organism |
Gene |
Locus |
Description |
Human Similarity |
NCBI accessions |
dog (Canis familiaris) |
ADRA1B1 |
-- |
adrenergic, alpha-1B-, receptor |
93.56(n) 97.56(a) |
403962 XM_536449.2 XP_536449.2 |
cow (Bos taurus) |
ADRA1B1 |
-- |
adrenergic, alpha-1B-, receptor |
94.05(n) 97.86(a) |
407140 XM_001250068.1 XP_001250069.1 |
rat (Rattus norvegicus) |
Adra1b1 |
-- |
adrenergic, alpha-1B-, receptor |
90.74(n) 95.73(a) |
24173 NM_016991.2 NP_058687.2 |
mouse (Mus musculus) |
Adra1b1, 5 |
11 (19.00 cM)5
|
adrenergic receptor, alpha 1b1, 5 |
90.55(n)1 96.31(a)1 |
115481 NM_007416.31 NP_031442.21 AK0048915 AK0438775 (see all 13) |
chicken (Gallus gallus) |
ADRA1B1 |
-- |
adrenergic, alpha-1B-, receptor |
68.82(n) 75.99(a) |
373890 XM_414483.2 XP_414483.2 |
About this table Species with no ortholog for ADRA1B
ENSEMBL Gene Tree for ADRA1B | Paralogs for ADRA1B(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for ADRA1B gene
- ADRA1A2 ADRA1D2 HRH22
Pseudogenes
- 1 related pseudogene
|
SNPs/Variants for ADRA1B(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for ADRA1B (up to first 250kb)
|
Disorders & Mutations for ADRA1B
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 104220
3 Novoseek disease relationships for ADRA1B gene
About this table
Genetic Association Database: ADRA1B Human Genome Epidemiology Navigator: ADRA1B (5 documents)
|
Medical News for ADRA1B(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for ADRA1B (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/133 PubMed articles for ADRA1B gene (see all 133
):- Genomic organization and expression of the human alpha 1B-adrenergic receptor. (PubMed id 1328250)1, 3, 4 Ramarao C.S....Graham R.M. (1992)
- The thiazide-sensitive Na(+)-Cl(-) cotransporter gene, C1784T, and adrenergic receptor-beta3 gene, T727C, may be gene polymorphisms susceptible to the antihypertensive effect of thiazide diuretics. (PubMed id 15824464)3, 6 Matayoshi T....Kawano Y. (2004)
- Variability within alpha- and beta-adrenoreceptor genes as a predictor of cardiovascular function at rest and in response to mental challenge. (PubMed id 12023679)3, 6 McCaffery J.M....Manuck S.B. (2002)
- Cloning and pharmacological characterization of human alpha-1 adrenergic receptors: sequence corrections and direct comparison with other species homologues. (PubMed id 7815325)3, 4 Schwinn D.A.... Bailey D.S. (1995)
- The alpha 1-adrenergic receptor that mediates smooth muscle contraction in human prostate has the pharmacological properties of the cloned human alpha 1c subtype. (PubMed id 8183249)3, 4 Forray C.... Gluchowski C. (1994)
- Effect of different G protein-coupled receptor kinases on phosphorylation and desensitization of the alpha1B-adrenergic receptor. (PubMed id 8617782)1, 3 Diviani D....Cotecchia S. (1996)
- Different internalization properties of the alpha1a- and alpha1b-adrenergic receptor subtypes: the potential role of receptor interaction with beta-arrestins and AP50. (PubMed id 18523139)1, 3 Stanasila L....Cotecchia S. (2008)
- Characterization of the phosphorylation sites involved in G protein-coupled receptor kinase- and protein kinase C-mediated desensitization of the alpha1B-adrenergic receptor. (PubMed id 9353340)1, 3 Diviani D....Cotecchia S. (1997)
- Ezrin directly interacts with the alpha1b-adrenergic receptor and plays a role in receptor recycling. (PubMed id 16352594)1, 3 Stanasila L....Cotecchia S. (2006)
- Dominance of the alpha1B-adrenergic receptor and its subcellular localization in human and TRAMP prostate cancer cell lines. (PubMed id 17365508)1, 3 Shi T....Perez D.M. (2007)
|
Search for ADRA1B
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing ADRA1B
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing ADRA1B
(According to HUGE)
About This Section
| -- |
Specialized Databases showing ADRA1B(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for ADRA1B(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for ADRA1B:

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Incremental update: 13 Oct 2009
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